Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5705

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
6,519,491	+				+0.4
6,519,584	+				+0.6
6,519,584	+				-0.2
6,519,584	+				+1.4
6,519,600	-				+0.2
6,519,629	-				+1.4
6,520,006	+		Pf6N2E2_5704	0.43	+1.4
6,520,006	+		Pf6N2E2_5704	0.43	+0.2
6,520,006	+		Pf6N2E2_5704	0.43	-0.2
6,520,006	+		Pf6N2E2_5704	0.43	+0.4
6,520,007	-		Pf6N2E2_5704	0.43	+0.4
6,520,007	-		Pf6N2E2_5704	0.43	+1.4
6,520,007	-		Pf6N2E2_5704	0.43	+0.3
6,520,081	-		Pf6N2E2_5704	0.54	-0.3
6,520,172	-		Pf6N2E2_5704	0.67	+1.4
6,520,177	+		Pf6N2E2_5704	0.68	-0.3
6,520,193	-		Pf6N2E2_5704	0.71	+1.4
6,520,636	-		Pf6N2E2_5705	0.18	+0.1
6,520,641	+		Pf6N2E2_5705	0.19	-1.5
6,520,701	+		Pf6N2E2_5705	0.23	-0.6
6,520,776	+		Pf6N2E2_5705	0.29	-1.5
6,520,830	-		Pf6N2E2_5705	0.33	+0.4
6,521,661	+				+0.4
6,521,742	+				-1.1
6,522,035	+		Pf6N2E2_5706	0.14	+0.3
6,522,035	+		Pf6N2E2_5706	0.14	+1.0
6,522,035	+		Pf6N2E2_5706	0.14	-0.1
6,522,035	+		Pf6N2E2_5706	0.14	-0.0
6,522,036	-		Pf6N2E2_5706	0.14	-1.7
6,522,211	-		Pf6N2E2_5706	0.31	+1.1
6,522,469	+		Pf6N2E2_5706	0.57	-2.4
6,522,590	+		Pf6N2E2_5706	0.69	-0.6
6,522,591	-		Pf6N2E2_5706	0.69	+1.4
6,522,591	-		Pf6N2E2_5706	0.69	-0.0
6,522,676	-		Pf6N2E2_5706	0.78	+1.3
6,522,701	+		Pf6N2E2_5706	0.80	+1.4
6,522,701	+		Pf6N2E2_5706	0.80	+1.4
6,522,702	-		Pf6N2E2_5706	0.80	+1.4