Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5656

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
6,466,482	+		Pf6N2E2_5655	0.40	+0.2
6,466,482	+		Pf6N2E2_5655	0.40	+1.4
6,466,509	+		Pf6N2E2_5655	0.46	+0.4
6,466,510	-		Pf6N2E2_5655	0.46	-1.3
6,466,523	+		Pf6N2E2_5655	0.49	-0.5
6,466,524	-		Pf6N2E2_5655	0.49	+0.5
6,466,524	-		Pf6N2E2_5655	0.49	+0.2
6,466,524	-		Pf6N2E2_5655	0.49	-2.2
6,466,524	-		Pf6N2E2_5655	0.49	+0.1
6,466,524	-		Pf6N2E2_5655	0.49	-0.9
6,466,562	+		Pf6N2E2_5655	0.58	-0.2
6,466,562	+		Pf6N2E2_5655	0.58	-0.3
6,466,562	+		Pf6N2E2_5655	0.58	+0.7
6,466,562	+		Pf6N2E2_5655	0.58	-0.9
6,466,563	-		Pf6N2E2_5655	0.58	+0.1
6,466,563	-		Pf6N2E2_5655	0.58	-0.3
6,466,569	-		Pf6N2E2_5655	0.59	-1.2
6,466,583	+		Pf6N2E2_5655	0.62	-0.4
6,466,583	+		Pf6N2E2_5655	0.62	-0.5
6,466,583	+		Pf6N2E2_5655	0.62	-0.5
6,466,584	-		Pf6N2E2_5655	0.62	-0.6
6,466,584	-		Pf6N2E2_5655	0.62	-0.1
6,466,584	-		Pf6N2E2_5655	0.62	+1.0
6,466,584	-		Pf6N2E2_5655	0.62	-0.0
6,466,584	-		Pf6N2E2_5655	0.62	+0.6
6,466,584	-		Pf6N2E2_5655	0.62	-0.6
6,466,799	+				+0.9
6,466,799	+				+0.5
6,466,799	+				+0.1
6,466,800	-				+0.6
6,466,800	-				+0.7
6,466,800	-				-1.0
6,466,800	-				+0.6
6,466,800	-				-0.0
6,466,828	+				-1.2
6,466,828	+				+0.3
6,466,828	+				-0.5
6,466,828	+				+1.4
6,466,828	+				+0.7
6,466,828	+				+1.4
6,466,828	+				+1.2
6,466,829	-				-0.2
6,466,830	+				+0.5
6,466,830	+				-0.4
6,466,831	-				+0.3
6,466,831	-				-0.5
6,466,831	-				-1.8
6,466,831	-				+0.1
6,466,831	-				+0.5
6,466,861	+				+0.4
6,466,871	+				-0.6
6,466,871	+				-0.0
6,466,872	-				+0.2
6,466,872	-				-0.3
6,466,903	+				+1.4
6,466,903	+				+0.4
6,466,903	+				-1.4
6,466,903	+				-0.9
6,466,904	-				-1.2
6,466,912	+				-1.2
6,466,912	+				+1.0
6,466,912	+				-0.2
6,466,913	-				-2.3
6,466,913	-				+0.3
6,466,913	-				-1.2
6,466,913	-				+0.4
6,466,913	-				+0.8
6,466,913	-				+0.2
6,466,931	+				+0.2
6,466,939	+				+0.1
6,466,978	+				-0.3
6,466,978	+				+1.4
6,466,978	+				+0.2
6,466,978	+				-0.8
6,466,978	+				+0.1
6,466,979	-				+0.9
6,466,979	-				+1.1
6,466,979	-				+0.4
6,466,996	+				-0.3
6,466,996	+				-2.8
6,466,996	+				-2.0
6,466,997	-				-0.5
6,466,997	-				+0.5
6,466,999	+				-0.0
6,466,999	+				+1.0
6,467,000	-				+1.4
6,467,000	-				-1.0
6,467,000	-				-0.3
6,467,000	-				-0.3
6,467,000	-				-0.5
6,467,016	-				-1.0
6,467,029	+				+0.6
6,467,029	+				-0.2
6,467,034	+				-0.5
6,467,034	+				-0.4
6,467,034	+				+0.1
6,467,034	+				+0.2
6,467,034	+				-1.0
6,467,034	+				-0.4
6,467,034	+				-0.3
6,467,035	-				-2.0
6,467,035	-				-0.5
6,467,035	-				-0.2
6,467,035	-				+1.4
6,467,035	-				+1.3
6,467,035	-				+0.0
6,467,035	-				+0.7
6,467,035	-				+0.6
6,467,096	-				-0.6
6,467,169	-				+0.4
6,467,173	+				+1.4
6,468,562	-				+0.4
6,468,562	-				-0.0
6,468,562	-				-0.9
6,468,655	-				+0.4
6,468,655	-				-0.0
6,468,655	-				-0.5
6,468,663	-				+0.3
6,468,663	-				+0.4
6,468,689	-				+0.0
6,468,689	-				+0.9
6,468,689	-				-1.1
6,468,689	-				-1.2
6,468,689	-				+0.6
6,468,689	-				+0.2
6,468,691	-				-0.8
6,468,691	-				+0.4
6,468,691	-				-0.1
6,468,707	-				-0.4
6,468,707	-				-0.7
6,468,707	-				-0.6
6,468,773	+				-1.2
6,468,864	+				-0.1
6,468,946	-				-0.4
6,468,983	-		Pf6N2E2_5657	0.15	+1.4
6,469,188	+				-1.9
6,469,233	-		Pf6N2E2_5658	0.13	-0.4
6,469,269	-		Pf6N2E2_5658	0.27	+0.5
6,469,353	-		Pf6N2E2_5658	0.59	+1.1
6,469,353	-		Pf6N2E2_5658	0.59	-0.8
6,469,353	-		Pf6N2E2_5658	0.59	-0.9
6,469,358	+		Pf6N2E2_5658	0.61	+0.2
6,469,358	+		Pf6N2E2_5658	0.61	+0.0
6,469,358	+		Pf6N2E2_5658	0.61	-0.5
6,469,358	+		Pf6N2E2_5658	0.61	+0.4
6,469,358	+		Pf6N2E2_5658	0.61	+0.8
6,469,358	+		Pf6N2E2_5658	0.61	-0.4
6,469,358	+		Pf6N2E2_5658	0.61	-0.7
6,469,359	-		Pf6N2E2_5658	0.61	-0.7
6,469,359	-		Pf6N2E2_5658	0.61	+0.7
6,469,359	-		Pf6N2E2_5658	0.61	-0.8
6,469,450	+				+0.2