Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5566

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
6,383,110	+		Pf6N2E2_5565	0.31	+0.6
6,383,110	+		Pf6N2E2_5565	0.31	-0.8
6,383,110	+		Pf6N2E2_5565	0.31	+0.3
6,383,110	+		Pf6N2E2_5565	0.31	-1.6
6,383,110	+		Pf6N2E2_5565	0.31	+0.5
6,383,110	+		Pf6N2E2_5565	0.31	+0.4
6,383,110	+		Pf6N2E2_5565	0.31	-0.1
6,383,110	+		Pf6N2E2_5565	0.31	-0.6
6,383,110	+		Pf6N2E2_5565	0.31	-0.0
6,383,111	-		Pf6N2E2_5565	0.32	+1.1
6,383,111	-		Pf6N2E2_5565	0.32	+0.4
6,383,111	-		Pf6N2E2_5565	0.32	+0.5
6,383,111	-		Pf6N2E2_5565	0.32	+2.0
6,383,221	-		Pf6N2E2_5565	0.40	-0.1
6,383,221	-		Pf6N2E2_5565	0.40	+0.7
6,383,352	-		Pf6N2E2_5565	0.50	+0.7
6,383,722	+		Pf6N2E2_5565	0.78	-0.9
6,383,722	+		Pf6N2E2_5565	0.78	+0.0
6,383,722	+		Pf6N2E2_5565	0.78	+0.1
6,383,722	+		Pf6N2E2_5565	0.78	-1.7
6,383,723	-		Pf6N2E2_5565	0.78	+1.0
6,383,723	-		Pf6N2E2_5565	0.78	+0.2
6,383,882	+		Pf6N2E2_5565	0.90	+0.1
6,384,000	+				+0.0
6,384,000	+				-0.3
6,384,000	+				+0.4
6,384,000	+				+0.4
6,384,000	+				+0.4
6,384,001	-				-0.1
6,384,001	-				-1.4
6,384,035	+				-0.3
6,384,044	+				+0.6
6,384,045	-				-0.7
6,384,054	-				-0.2
6,384,259	-		Pf6N2E2_5566	0.13	-0.5
6,384,259	-		Pf6N2E2_5566	0.13	+0.5
6,385,024	+		Pf6N2E2_5566	0.53	+1.1
6,385,024	+		Pf6N2E2_5566	0.53	+1.1
6,385,025	-		Pf6N2E2_5566	0.53	+0.7
6,385,025	-		Pf6N2E2_5566	0.53	+2.1
6,385,053	+		Pf6N2E2_5566	0.54	+0.7
6,385,053	+		Pf6N2E2_5566	0.54	-0.4
6,385,053	+		Pf6N2E2_5566	0.54	+0.4
6,385,054	-		Pf6N2E2_5566	0.54	+0.4
6,385,054	-		Pf6N2E2_5566	0.54	+1.4
6,385,054	-		Pf6N2E2_5566	0.54	-0.9
6,385,054	-		Pf6N2E2_5566	0.54	+0.4
6,385,170	+		Pf6N2E2_5566	0.61	+1.0
6,385,171	-		Pf6N2E2_5566	0.61	-0.0
6,385,173	+		Pf6N2E2_5566	0.61	-0.6
6,385,173	+		Pf6N2E2_5566	0.61	+0.6
6,385,174	-		Pf6N2E2_5566	0.61	+0.5
6,385,174	-		Pf6N2E2_5566	0.61	-1.2
6,385,174	-		Pf6N2E2_5566	0.61	+0.3
6,385,261	+		Pf6N2E2_5566	0.65	+0.4
6,385,395	+		Pf6N2E2_5566	0.72	+0.2
6,385,396	-		Pf6N2E2_5566	0.72	+0.5
6,385,396	-		Pf6N2E2_5566	0.72	-0.0
6,385,396	-		Pf6N2E2_5566	0.72	+0.5
6,385,396	-		Pf6N2E2_5566	0.72	-1.3
6,385,398	+		Pf6N2E2_5566	0.72	-0.3
6,385,398	+		Pf6N2E2_5566	0.72	+1.0
6,385,418	-		Pf6N2E2_5566	0.74	-0.1
6,385,431	+		Pf6N2E2_5566	0.74	+0.5
6,385,470	+		Pf6N2E2_5566	0.76	-0.2
6,385,501	-		Pf6N2E2_5566	0.78	+0.4
6,385,501	-		Pf6N2E2_5566	0.78	+0.5
6,385,501	-		Pf6N2E2_5566	0.78	+0.0
6,385,501	-		Pf6N2E2_5566	0.78	+0.3
6,385,501	-		Pf6N2E2_5566	0.78	+1.0
6,385,560	+		Pf6N2E2_5566	0.81	+0.6
6,385,560	+		Pf6N2E2_5566	0.81	-0.0
6,385,560	+		Pf6N2E2_5566	0.81	-0.6
6,385,560	+		Pf6N2E2_5566	0.81	-0.1
6,385,560	+		Pf6N2E2_5566	0.81	+0.4
6,385,561	-		Pf6N2E2_5566	0.81	+0.3
6,385,561	-		Pf6N2E2_5566	0.81	+0.3
6,385,561	-		Pf6N2E2_5566	0.81	-0.5
6,385,602	+		Pf6N2E2_5566	0.83	+0.1
6,385,689	+		Pf6N2E2_5566	0.88	+1.4
6,385,689	+		Pf6N2E2_5566	0.88	+0.1
6,385,689	+		Pf6N2E2_5566	0.88	+0.7
6,385,689	+		Pf6N2E2_5566	0.88	-0.7
6,385,689	+		Pf6N2E2_5566	0.88	+0.0
6,385,690	-		Pf6N2E2_5566	0.88	-0.0
6,385,690	-		Pf6N2E2_5566	0.88	+0.4
6,385,695	+		Pf6N2E2_5566	0.88	-0.6
6,385,695	+		Pf6N2E2_5566	0.88	+0.5
6,385,695	+		Pf6N2E2_5566	0.88	+0.5
6,385,695	+		Pf6N2E2_5566	0.88	+1.2
6,385,695	+		Pf6N2E2_5566	0.88	-0.5
6,385,695	+		Pf6N2E2_5566	0.88	-0.2
6,385,695	+		Pf6N2E2_5566	0.88	-1.2
6,385,695	+		Pf6N2E2_5566	0.88	+0.3
6,385,695	+		Pf6N2E2_5566	0.88	+0.2
6,385,695	+		Pf6N2E2_5566	0.88	+0.0
6,385,695	+		Pf6N2E2_5566	0.88	+1.0
6,385,696	-		Pf6N2E2_5566	0.88	+1.0
6,385,696	-		Pf6N2E2_5566	0.88	-0.6
6,385,696	-		Pf6N2E2_5566	0.88	+0.8
6,385,696	-		Pf6N2E2_5566	0.88	+0.5
6,385,769	+				+0.7
6,385,769	+				-1.0
6,385,769	+				+0.3
6,385,769	+				+1.4
6,385,770	-				+0.1
6,385,776	+				+0.4
6,385,777	-				+0.2
6,385,777	-				+0.2
6,386,020	+				+1.4
6,386,037	-				+0.4
6,386,045	+				+0.4
6,386,046	-				+0.6
6,386,136	-				-0.8
6,386,136	-				+0.0
6,386,248	+		Pf6N2E2_5567	0.16	-0.3
6,386,248	+		Pf6N2E2_5567	0.16	-1.4
6,386,249	-		Pf6N2E2_5567	0.16	-0.0
6,386,821	+				+1.8
6,386,838	-				-1.3
6,386,859	+				+1.4
6,386,859	+				+0.2
6,386,868	+				-0.4
6,386,868	+				+0.1