Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5520

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
6,337,870	+		Pf6N2E2_5518	0.73	-0.5
6,337,959	+		Pf6N2E2_5518	0.83	-1.0
6,337,959	+		Pf6N2E2_5518	0.83	-0.4
6,337,960	-		Pf6N2E2_5518	0.83	-0.3
6,337,960	-		Pf6N2E2_5518	0.83	-1.2
6,338,009	-		Pf6N2E2_5518	0.88	+0.1
6,338,018	+		Pf6N2E2_5518	0.89	-0.3
6,338,018	+		Pf6N2E2_5518	0.89	+0.3
6,338,018	+		Pf6N2E2_5518	0.89	-0.0
6,338,018	+		Pf6N2E2_5518	0.89	+0.1
6,338,018	+		Pf6N2E2_5518	0.89	+0.6
6,338,019	-		Pf6N2E2_5518	0.89	-1.9
6,338,356	+		Pf6N2E2_5519	0.18	-0.1
6,338,356	+		Pf6N2E2_5519	0.18	+0.1
6,338,357	-		Pf6N2E2_5519	0.18	+0.1
6,338,358	+		Pf6N2E2_5519	0.18	+1.8
6,338,358	+		Pf6N2E2_5519	0.18	-0.8
6,338,358	+		Pf6N2E2_5519	0.18	+0.3
6,338,359	-		Pf6N2E2_5519	0.18	-0.2
6,338,457	-		Pf6N2E2_5519	0.35	-0.3
6,338,569	-		Pf6N2E2_5519	0.54	+0.9
6,338,690	+		Pf6N2E2_5519	0.75	+1.2
6,338,690	+		Pf6N2E2_5519	0.75	+0.2
6,338,691	-		Pf6N2E2_5519	0.75	+0.4
6,338,714	-		Pf6N2E2_5519	0.79	-0.9
6,338,808	+				-0.6
6,338,972	+				-1.4
6,339,129	+		Pf6N2E2_5520	0.14	-0.9
6,339,758	+		Pf6N2E2_5520	0.45	-0.2
6,339,951	-		Pf6N2E2_5520	0.55	+1.4
6,339,951	-		Pf6N2E2_5520	0.55	-0.6
6,340,010	+		Pf6N2E2_5520	0.58	-2.3
6,340,010	+		Pf6N2E2_5520	0.58	-2.2
6,340,010	+		Pf6N2E2_5520	0.58	+1.4
6,340,011	-		Pf6N2E2_5520	0.58	-0.9
6,340,121	+		Pf6N2E2_5520	0.63	-1.6
6,340,253	+		Pf6N2E2_5520	0.70	-0.5
6,340,253	+		Pf6N2E2_5520	0.70	+1.4
6,340,253	+		Pf6N2E2_5520	0.70	-1.8
6,340,253	+		Pf6N2E2_5520	0.70	-2.4
6,340,254	-		Pf6N2E2_5520	0.70	-1.3
6,340,254	-		Pf6N2E2_5520	0.70	-1.6
6,340,254	-		Pf6N2E2_5520	0.70	-1.3
6,340,254	-		Pf6N2E2_5520	0.70	-1.9
6,340,254	-		Pf6N2E2_5520	0.70	-0.2
6,340,400	+		Pf6N2E2_5520	0.77	-0.3
6,340,401	-				-0.9
6,340,401	-		Pf6N2E2_5520	0.77	-0.6
6,340,401	-		Pf6N2E2_5520	0.77	-1.9
6,340,401	-		Pf6N2E2_5520	0.77	-0.2
6,340,435	+		Pf6N2E2_5520	0.78	-2.9
6,340,516	+		Pf6N2E2_5520	0.82	-1.6
6,340,516	+		Pf6N2E2_5520	0.82	-1.9
6,340,516	+		Pf6N2E2_5520	0.82	-1.6
6,340,516	+		Pf6N2E2_5520	0.82	-2.9
6,340,517	-		Pf6N2E2_5520	0.83	-2.0
6,340,619	+		Pf6N2E2_5520	0.88	-0.2
6,340,620	-		Pf6N2E2_5520	0.88	-2.0
6,340,751	+				-0.6
6,340,751	+				-1.2
6,340,751	+				-1.9
6,340,751	+				-1.2
6,340,752	-				-1.9
6,340,752	-				-0.6
6,340,754	+				-1.3
6,340,754	+				-2.5
6,340,755	-				-0.6
6,340,755	-				-0.8
6,340,767	+				-1.5
6,340,767	+				-1.4
6,340,896	-				-0.9
6,340,896	-				-0.5
6,341,037	+		Pf6N2E2_5521	0.13	+1.1
6,341,037	+		Pf6N2E2_5521	0.13	-0.5
6,341,037	+		Pf6N2E2_5521	0.13	+0.3
6,341,037	+		Pf6N2E2_5521	0.13	-0.3
6,341,037	+		Pf6N2E2_5521	0.13	-0.5
6,341,037	+		Pf6N2E2_5521	0.13	+0.5
6,341,037	+		Pf6N2E2_5521	0.13	+1.5
6,341,038	-		Pf6N2E2_5521	0.13	+0.7
6,341,038	-		Pf6N2E2_5521	0.13	-1.2
6,341,076	+		Pf6N2E2_5521	0.17	+1.4
6,341,076	+		Pf6N2E2_5521	0.17	-0.4
6,341,088	+		Pf6N2E2_5521	0.18	+0.4
6,341,088	+		Pf6N2E2_5521	0.18	+0.2
6,341,088	+		Pf6N2E2_5521	0.18	-0.1
6,341,132	+		Pf6N2E2_5521	0.23	+0.8
6,341,400	+		Pf6N2E2_5521	0.52	-1.9
6,341,417	+		Pf6N2E2_5521	0.54	+0.7
6,341,536	+		Pf6N2E2_5521	0.67	+1.0
6,341,536	+		Pf6N2E2_5521	0.67	+0.9
6,341,536	+		Pf6N2E2_5521	0.67	+1.4
6,341,536	+		Pf6N2E2_5521	0.67	+0.4
6,341,536	+		Pf6N2E2_5521	0.67	+0.7
6,341,537	-		Pf6N2E2_5521	0.67	+1.0
6,341,537	-		Pf6N2E2_5521	0.67	+0.9
6,341,537	-		Pf6N2E2_5521	0.67	+0.8
6,341,537	-		Pf6N2E2_5521	0.67	-0.1
6,341,537	-		Pf6N2E2_5521	0.67	-0.0
6,341,595	+		Pf6N2E2_5521	0.74	-0.9
6,341,612	+		Pf6N2E2_5521	0.75	+0.4
6,341,845	+				+1.0