Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5173

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,961,276	+				-1.1
5,961,276	+				-0.4
5,961,276	+				-0.2
5,961,277	-				-0.4
5,961,277	-				-0.5
5,961,278	+				-0.8
5,961,279	-				+0.6
5,961,369	+				-2.8
5,961,369	+				-1.2
5,961,369	+				-1.2
5,961,369	+				+0.7
5,961,369	+				-0.5
5,961,370	-				-1.1
5,961,370	-				-2.6
5,961,444	+				-0.4
5,961,444	+				-0.2
5,961,445	-				-1.3
5,961,449	+				-0.3
5,961,449	+				-0.1
5,961,449	+				-1.1
5,961,715	+		Pf6N2E2_5172	0.45	+1.4
5,961,715	+		Pf6N2E2_5172	0.45	-0.5
5,961,715	+		Pf6N2E2_5172	0.45	-1.0
5,961,716	-		Pf6N2E2_5172	0.46	+0.1
5,961,716	-		Pf6N2E2_5172	0.46	-0.7
5,961,716	-		Pf6N2E2_5172	0.46	+1.4
5,962,293	-		Pf6N2E2_5173	0.56	-2.0
5,962,356	+		Pf6N2E2_5173	0.75	-1.4
5,962,356	+		Pf6N2E2_5173	0.75	-0.4
5,962,357	-		Pf6N2E2_5173	0.76	-0.5
5,962,357	-		Pf6N2E2_5173	0.76	-1.4
5,962,357	-		Pf6N2E2_5173	0.76	-0.9
5,962,357	-		Pf6N2E2_5173	0.76	+1.4
5,962,542	+		Pf6N2E2_5174	0.24	+0.2
5,962,543	-		Pf6N2E2_5174	0.24	-0.8
5,962,602	+		Pf6N2E2_5174	0.38	+0.9
5,962,603	-		Pf6N2E2_5174	0.38	-1.8
5,962,603	-		Pf6N2E2_5174	0.38	-0.2
5,962,795	+		Pf6N2E2_5174	0.84	+0.7
5,962,916	+				-1.2
5,962,946	+				+0.8
5,962,947	-				-4.1
5,962,947	-				-2.5
5,962,964	+				-1.9
5,962,964	+				+1.4
5,962,964	+				-0.2
5,962,965	-				-4.2
5,963,015	-				+1.4
5,963,078	+				-3.0
5,963,079	-				-1.2
5,963,079	-				-2.3
5,963,079	-				+1.4
5,963,142	+				+1.1
5,963,142	+				+2.4
5,963,143	-				-2.2
5,963,165	+				+0.8
5,963,165	+				+1.4
5,963,165	+				+1.6
5,963,166	-				-0.2
5,963,203	+				+1.4
5,963,203	+				+0.3
5,963,203	+				+1.7
5,963,203	+				+1.1
5,963,203	+				-0.1
5,963,203	+				+1.9
5,963,203	+				+1.9
5,963,203	+				-0.0
5,963,204	-				-1.4
5,963,209	+				+1.1
5,963,209	+				+1.5
5,963,209	+				+1.7
5,963,209	+				+0.4
5,963,209	+				+1.3
5,963,209	+				+1.4
5,963,209	+				+2.3
5,963,209	+				+0.4
5,963,210	-				-3.5
5,963,210	-				-1.2
5,963,212	+				+1.1
5,963,212	+				-0.2
5,963,212	+				+1.0
5,963,212	+				-1.8
5,963,213	-				-1.6
5,963,213	-				-1.2
5,963,213	-				-1.6
5,963,213	-				-2.3
5,963,278	-				-1.2
5,963,278	-				+1.4
5,963,327	+				-1.4
5,963,327	+				-0.6
5,963,327	+				+1.4
5,963,327	+				-0.6
5,963,327	+				+0.4
5,963,327	+				-0.2
5,963,327	+				-0.2
5,963,328	-				+0.2
5,963,328	-				-2.8
5,963,328	-				-1.4
5,963,328	-				+1.4
5,963,329	+				-0.2
5,963,329	+				-1.1
5,963,329	+				-0.2
5,963,329	+				+0.4
5,963,330	-				-3.2
5,963,333	+				+0.4
5,963,366	+				-0.6
5,963,366	+				-0.9
5,963,366	+				-0.2
5,963,367	-				-1.9
5,963,367	-				-2.1
5,963,367	-				-0.9
5,963,367	-				-0.2
5,963,367	-				-1.4
5,963,434	+		Pf6N2E2_5175	0.10	-1.2
5,963,434	+		Pf6N2E2_5175	0.10	-1.4
5,963,434	+		Pf6N2E2_5175	0.10	-0.6