Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5022

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,786,478	+				-0.5
5,786,478	+				+1.4
5,786,478	+				+0.6
5,786,478	+				-0.8
5,786,478	+				+0.5
5,786,478	+				-0.2
5,786,478	+				-0.5
5,786,479	-				+0.2
5,786,479	-				-0.1
5,786,479	-				-0.1
5,786,479	-				+0.6
5,786,479	-				-1.4
5,786,492	+				-0.7
5,786,492	+				-0.3
5,786,527	-				+0.3
5,786,527	-				+0.4
5,786,626	+				+0.4
5,786,627	-				+1.1
5,786,689	+				-0.9
5,786,689	+				-0.4
5,787,289	-				+0.8
5,787,289	-				+0.4
5,787,289	-				+0.1
5,787,289	-				+0.4
5,787,305	-				+0.4
5,787,305	-				+0.3
5,787,305	-				-0.2
5,787,305	-				-0.3
5,787,305	-				+1.4
5,787,343	+				+1.4
5,787,344	-				-0.6
5,787,344	-				+0.4
5,787,344	-				-1.1
5,787,344	-				+1.4
5,787,347	-				-0.3
5,787,347	-				-0.6
5,787,347	-				+2.0
5,787,347	-				+1.4
5,787,366	-				+0.0
5,787,366	-				+0.8
5,787,366	-				-0.0
5,787,366	-				+0.3
5,787,366	-				-0.5
5,787,366	-				-0.8
5,787,370	-				+1.4
5,787,439	+				-0.9
5,787,439	+				-1.0
5,787,440	-				+1.2
5,788,752	-				-0.7
5,788,752	-				-0.3
5,789,010	-		Pf6N2E2_5023	0.41	+0.3
5,789,010	-		Pf6N2E2_5023	0.41	+0.2
5,789,010	-		Pf6N2E2_5023	0.41	+0.6
5,789,309	-		Pf6N2E2_5023	0.89	+0.1
5,789,309	-		Pf6N2E2_5023	0.89	+0.8
5,789,309	-		Pf6N2E2_5023	0.89	-0.5
5,789,309	-		Pf6N2E2_5023	0.89	-0.2
5,789,313	-		Pf6N2E2_5023	0.90	+2.1
5,789,313	-		Pf6N2E2_5023	0.90	-0.4
5,789,313	-		Pf6N2E2_5023	0.90	-0.6
5,789,313	-		Pf6N2E2_5023	0.90	-0.5
5,789,358	-				-1.0
5,789,369	-				+0.0
5,789,480	-		Pf6N2E2_5024	0.12	-0.2
5,789,480	-		Pf6N2E2_5024	0.12	+0.0
5,789,573	-		Pf6N2E2_5024	0.25	-0.1
5,789,598	-		Pf6N2E2_5024	0.28	-0.3