Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4638

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,366,859	+				-0.2
5,366,859	+				-0.2
5,366,860	-				-0.5
5,366,936	+		Pf6N2E2_4636	0.10	-1.8
5,367,023	+		Pf6N2E2_4636	0.22	-0.4
5,367,023	+		Pf6N2E2_4636	0.22	-1.0
5,367,222	-		Pf6N2E2_4636	0.49	-0.4
5,367,303	-		Pf6N2E2_4636	0.61	-0.4
5,367,319	+		Pf6N2E2_4636	0.63	+1.7
5,367,319	+		Pf6N2E2_4636	0.63	-1.4
5,367,319	+		Pf6N2E2_4636	0.63	+0.4
5,367,320	-		Pf6N2E2_4636	0.63	-0.8
5,367,320	-		Pf6N2E2_4636	0.63	-0.1
5,367,320	-		Pf6N2E2_4636	0.63	-0.3
5,367,320	-		Pf6N2E2_4636	0.63	-2.2
5,367,497	+		Pf6N2E2_4636	0.87	+0.5
5,367,497	+		Pf6N2E2_4636	0.87	-0.4
5,367,498	-		Pf6N2E2_4636	0.87	+0.3
5,367,498	-		Pf6N2E2_4636	0.87	-1.5
5,367,530	+				-0.2
5,367,531	-				+0.1
5,367,531	-				-0.6
5,367,536	+				-0.5
5,367,537	-				-1.3
5,367,537	-				+0.8
5,367,537	-				+1.3
5,367,537	-				-1.4
5,367,670	+				-1.0
5,367,670	+				-0.6
5,367,670	+				-1.1
5,367,671	-				+0.0
5,367,671	-				+0.4
5,367,671	-				-0.0
5,367,671	-				-0.7
5,367,674	+				-0.3
5,367,674	+				+0.3
5,367,674	+				+0.1
5,367,674	+				-1.0
5,367,675	-				-0.2
5,367,675	-				+1.3
5,367,675	-				+0.7
5,367,675	-				-1.3
5,367,696	+				+0.5
5,367,696	+				-0.8
5,367,697	-				+0.3
5,367,707	+				-0.9
5,367,708	-				-0.6
5,367,708	-				+0.2
5,367,833	+				+0.4
5,367,833	+				-0.8
5,367,834	-				+0.3
5,367,842	-				+0.2
5,367,910	-				-2.4
5,367,911	+				+1.3
5,367,912	-				+1.3
5,367,912	-				-0.8
5,368,010	+		Pf6N2E2_4638	0.19	+0.3
5,368,085	+		Pf6N2E2_4638	0.28	-2.3
5,368,086	-		Pf6N2E2_4638	0.28	+1.3
5,368,086	-		Pf6N2E2_4638	0.28	-2.0
5,368,163	+		Pf6N2E2_4638	0.37	+1.3
5,368,163	+		Pf6N2E2_4638	0.37	-1.5
5,368,163	+		Pf6N2E2_4638	0.37	-1.5
5,368,164	-		Pf6N2E2_4638	0.37	-0.7
5,368,164	-		Pf6N2E2_4638	0.37	-0.3
5,368,571	+		Pf6N2E2_4638	0.85	+0.3
5,368,571	+		Pf6N2E2_4638	0.85	+1.3
5,368,571	+		Pf6N2E2_4638	0.85	-1.0
5,368,599	-		Pf6N2E2_4638	0.89	+1.3
5,368,599	-		Pf6N2E2_4638	0.89	-1.8
5,368,677	-				-2.3
5,368,701	+				+1.3
5,368,702	-				+0.4
5,368,718	-				+0.3