Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4597

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,323,021	+		Pf6N2E2_4595	0.26	-0.4
5,323,021	+		Pf6N2E2_4595	0.26	-0.4
5,323,021	+		Pf6N2E2_4595	0.26	+0.2
5,323,021	+		Pf6N2E2_4595	0.26	-1.0
5,323,021	+		Pf6N2E2_4595	0.26	-1.0
5,323,021	+		Pf6N2E2_4595	0.26	+0.1
5,323,022	-		Pf6N2E2_4595	0.27	+0.3
5,323,022	-		Pf6N2E2_4595	0.27	-0.1
5,323,022	-		Pf6N2E2_4595	0.27	+0.1
5,323,022	-		Pf6N2E2_4595	0.27	-0.5
5,323,024	+		Pf6N2E2_4595	0.27	+0.4
5,323,025	-		Pf6N2E2_4595	0.27	+1.3
5,323,025	-		Pf6N2E2_4595	0.27	+3.9
5,323,025	-		Pf6N2E2_4595	0.27	+0.5
5,323,025	-		Pf6N2E2_4595	0.27	+1.3
5,323,228	+		Pf6N2E2_4595	0.74	-1.4
5,323,228	+		Pf6N2E2_4595	0.74	-0.5
5,323,228	+		Pf6N2E2_4595	0.74	+0.5
5,323,228	+		Pf6N2E2_4595	0.74	+0.3
5,323,228	+		Pf6N2E2_4595	0.74	-0.7
5,323,228	+		Pf6N2E2_4595	0.74	+1.3
5,323,229	-		Pf6N2E2_4595	0.74	-0.5
5,323,229	-		Pf6N2E2_4595	0.74	+0.7
5,323,229	-		Pf6N2E2_4595	0.74	+0.8
5,323,229	-		Pf6N2E2_4595	0.74	+0.3
5,323,242	-		Pf6N2E2_4595	0.77	-1.7
5,323,382	+				+0.6
5,323,383	-				-0.4
5,323,390	-				-2.0
5,323,413	-				-1.7
5,323,420	+				-2.3
5,323,420	+				-3.5
5,323,420	+				-2.8
5,323,429	+		Pf6N2E2_4596	0.10	-2.1
5,323,437	+		Pf6N2E2_4596	0.11	-0.3
5,323,438	-		Pf6N2E2_4596	0.12	-2.6
5,323,444	+		Pf6N2E2_4596	0.13	-2.7
5,323,444	+		Pf6N2E2_4596	0.13	+0.3
5,323,444	+		Pf6N2E2_4596	0.13	+0.3
5,323,444	+		Pf6N2E2_4596	0.13	-2.8
5,323,444	+		Pf6N2E2_4596	0.13	-3.1
5,323,444	+		Pf6N2E2_4596	0.13	-0.9
5,323,445	-		Pf6N2E2_4596	0.13	-2.7
5,323,445	-		Pf6N2E2_4596	0.13	-0.3
5,323,445	-		Pf6N2E2_4596	0.13	-1.3
5,323,445	-		Pf6N2E2_4596	0.13	-4.0
5,323,445	-		Pf6N2E2_4596	0.13	-3.1
5,323,445	-		Pf6N2E2_4596	0.13	-3.8
5,323,445	-		Pf6N2E2_4596	0.13	-1.9
5,323,571	+		Pf6N2E2_4596	0.33	-1.6
5,323,571	+		Pf6N2E2_4596	0.33	-1.9
5,323,571	+		Pf6N2E2_4596	0.33	+0.1
5,323,571	+		Pf6N2E2_4596	0.33	-3.6
5,323,571	+		Pf6N2E2_4596	0.33	-2.1
5,323,571	+		Pf6N2E2_4596	0.33	-0.7
5,323,571	+		Pf6N2E2_4596	0.33	-0.5
5,323,572	-		Pf6N2E2_4596	0.33	-3.2
5,323,580	+		Pf6N2E2_4596	0.34	-3.0
5,323,581	-		Pf6N2E2_4596	0.35	-2.6
5,323,625	+		Pf6N2E2_4596	0.42	-1.7
5,323,626	-		Pf6N2E2_4596	0.42	-2.7
5,324,004	-				+0.0
5,324,005	+				-2.2
5,324,005	+				-2.5
5,324,005	+				-2.6
5,324,005	+				-3.8
5,324,005	+				-0.7
5,324,005	+				-0.3
5,324,006	-				-0.1
5,324,006	-				-1.1
5,324,006	-				-0.0
5,324,016	+				-2.9
5,324,016	+				-1.7
5,324,016	+				+1.3
5,324,016	+				-2.1
5,324,017	-				-3.0
5,324,017	-				-2.1
5,324,017	-				-1.8
5,324,257	-		Pf6N2E2_4597	0.24	-3.2
5,324,283	+		Pf6N2E2_4597	0.26	-2.9
5,324,283	+		Pf6N2E2_4597	0.26	-1.7
5,324,283	+		Pf6N2E2_4597	0.26	-2.8
5,324,283	+		Pf6N2E2_4597	0.26	-1.7
5,324,283	+		Pf6N2E2_4597	0.26	-1.4
5,324,283	+		Pf6N2E2_4597	0.26	-0.3
5,324,284	-		Pf6N2E2_4597	0.27	-2.7
5,324,284	-		Pf6N2E2_4597	0.27	-4.3
5,324,284	-		Pf6N2E2_4597	0.27	-1.5
5,324,284	-		Pf6N2E2_4597	0.27	-1.9
5,324,335	-		Pf6N2E2_4597	0.31	+0.7
5,324,370	+		Pf6N2E2_4597	0.34	+1.3
5,324,370	+		Pf6N2E2_4597	0.34	-2.6
5,324,370	+		Pf6N2E2_4597	0.34	-3.3
5,324,371	-		Pf6N2E2_4597	0.35	-0.9
5,324,371	-		Pf6N2E2_4597	0.35	+0.3
5,324,433	+		Pf6N2E2_4597	0.40	-1.5
5,324,433	+		Pf6N2E2_4597	0.40	+0.3
5,324,433	+		Pf6N2E2_4597	0.40	-0.9
5,324,434	-		Pf6N2E2_4597	0.40	-2.4
5,324,434	-		Pf6N2E2_4597	0.40	-2.8
5,324,434	-		Pf6N2E2_4597	0.40	-1.0
5,325,009	+				-2.6
5,325,018	+				-3.4
5,325,018	+				+1.3
5,325,019	-				-2.3
5,325,019	-				-1.7
5,325,019	-				-3.1
5,325,019	-				-2.0
5,325,019	-				-0.9
5,325,030	+				-1.7
5,325,031	-				-2.0
5,325,031	-				-2.4
5,325,031	-				+0.3
5,325,161	+				-0.4
5,325,161	+				-2.6
5,325,161	+				+1.3
5,325,161	+				-0.1
5,325,161	+				+0.3
5,325,161	+				-1.5
5,325,161	+				-1.3
5,325,161	+				-1.3
5,325,161	+				-0.3
5,325,162	-				-0.2
5,325,167	+				-0.0
5,325,168	-				+0.2
5,325,314	+				-0.0
5,325,314	+				+1.5
5,325,314	+				+0.3
5,325,314	+				-0.8
5,325,314	+				+0.6
5,325,314	+				+0.3
5,325,314	+				+1.2
5,325,315	-				-0.7
5,325,315	-				+1.3
5,325,315	-				+2.9
5,325,315	-				+0.0
5,325,315	-				-0.1
5,325,315	-				-0.1
5,325,315	-				+0.1
5,325,315	-				+0.0
5,325,315	-				-0.1
5,325,318	+				+0.6
5,325,318	+				+0.7
5,325,318	+				+1.3
5,325,318	+				-0.5
5,325,319	-				+1.6
5,325,319	-				-0.3
5,325,446	+		Pf6N2E2_4598	0.17	-0.0
5,325,446	+		Pf6N2E2_4598	0.17	+0.1
5,325,446	+		Pf6N2E2_4598	0.17	-0.0
5,325,446	+		Pf6N2E2_4598	0.17	+0.2
5,325,446	+		Pf6N2E2_4598	0.17	+0.8
5,325,447	-		Pf6N2E2_4598	0.18	+1.3
5,325,447	-		Pf6N2E2_4598	0.18	+0.5
5,325,447	-		Pf6N2E2_4598	0.18	-0.3
5,325,447	-		Pf6N2E2_4598	0.18	-0.3
5,325,447	-		Pf6N2E2_4598	0.18	+0.1
5,325,681	+				+0.3
5,325,682	-				-1.5
5,325,682	-				+1.3
5,325,682	-				-0.3
5,325,682	-				-0.1
5,325,682	-				+0.2
5,325,682	-				-0.3
5,325,682	-				-0.2
5,325,828	+		Pf6N2E2_4599	0.23	+0.1
5,325,828	+		Pf6N2E2_4599	0.23	-1.5
5,325,829	-		Pf6N2E2_4599	0.23	-0.8
5,326,020	-		Pf6N2E2_4599	0.55	-1.0