Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4432

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,162,319	+				-0.6
5,162,319	+				+0.1
5,162,331	+				-0.1
5,162,338	+				-0.5
5,162,342	+				+1.3
5,163,273	+				+0.3
5,164,057	+		Pf6N2E2_4432	0.40	-1.0
5,164,058	-		Pf6N2E2_4432	0.40	+0.7
5,164,073	+		Pf6N2E2_4432	0.41	-0.3
5,164,073	+		Pf6N2E2_4432	0.41	-0.5
5,164,073	+		Pf6N2E2_4432	0.41	-0.2
5,164,073	+		Pf6N2E2_4432	0.41	+0.3
5,164,073	+		Pf6N2E2_4432	0.41	-1.1
5,164,073	+		Pf6N2E2_4432	0.41	-1.6
5,164,074	-		Pf6N2E2_4432	0.41	+2.1
5,164,074	-		Pf6N2E2_4432	0.41	+0.1
5,164,107	+		Pf6N2E2_4432	0.42	-0.6
5,164,107	+		Pf6N2E2_4432	0.42	+0.2
5,164,107	+		Pf6N2E2_4432	0.42	+1.3
5,164,107	+		Pf6N2E2_4432	0.42	-0.1
5,164,108	-		Pf6N2E2_4432	0.43	-0.3
5,164,108	-		Pf6N2E2_4432	0.43	+0.6
5,164,108	-		Pf6N2E2_4432	0.43	-0.2
5,164,182	+		Pf6N2E2_4432	0.46	-1.5
5,164,182	+		Pf6N2E2_4432	0.46	-0.7
5,164,182	+		Pf6N2E2_4432	0.46	-0.5
5,164,182	+		Pf6N2E2_4432	0.46	+0.5
5,164,183	-		Pf6N2E2_4432	0.46	-2.4
5,164,183	-		Pf6N2E2_4432	0.46	-1.0
5,164,183	-		Pf6N2E2_4432	0.46	+1.3
5,164,183	-		Pf6N2E2_4432	0.46	-0.1
5,164,183	-		Pf6N2E2_4432	0.46	-0.3
5,164,183	-		Pf6N2E2_4432	0.46	-2.6
5,164,183	-		Pf6N2E2_4432	0.46	-3.0
5,164,262	-		Pf6N2E2_4432	0.51	-0.3
5,164,739	+		Pf6N2E2_4432	0.75	-0.1
5,164,739	+		Pf6N2E2_4432	0.75	+0.2
5,164,740	-		Pf6N2E2_4432	0.75	-0.2
5,164,740	-		Pf6N2E2_4432	0.75	+0.7
5,164,830	-		Pf6N2E2_4432	0.80	-0.5
5,164,831	+		Pf6N2E2_4432	0.80	-1.3
5,164,968	-		Pf6N2E2_4432	0.87	+0.6
5,165,129	+				+0.1
5,165,130	-				-0.8
5,165,130	-				-0.1
5,165,218	+				-1.3
5,165,218	+				+1.3
5,165,219	-				+0.1
5,165,287	+				+0.3
5,165,288	-				+0.4
5,165,302	+				-0.3
5,165,406	+		Pf6N2E2_4433	0.16	-1.4
5,165,406	+		Pf6N2E2_4433	0.16	-0.1
5,165,406	+		Pf6N2E2_4433	0.16	-0.4
5,165,407	-		Pf6N2E2_4433	0.16	+0.5
5,165,407	-		Pf6N2E2_4433	0.16	+0.3
5,165,566	+		Pf6N2E2_4433	0.29	+0.6
5,165,566	+		Pf6N2E2_4433	0.29	-0.7
5,165,566	+		Pf6N2E2_4433	0.29	-0.0
5,165,566	+		Pf6N2E2_4433	0.29	-1.8
5,165,567	-		Pf6N2E2_4433	0.29	+1.1
5,165,567	-		Pf6N2E2_4433	0.29	-0.8
5,165,567	-		Pf6N2E2_4433	0.29	-0.7
5,165,567	-		Pf6N2E2_4433	0.29	+0.6
5,165,569	+		Pf6N2E2_4433	0.29	-0.2
5,165,570	-		Pf6N2E2_4433	0.29	-0.8
5,165,608	+		Pf6N2E2_4433	0.32	-1.0
5,165,608	+		Pf6N2E2_4433	0.32	-0.2
5,165,609	-		Pf6N2E2_4433	0.32	+0.1
5,165,609	-		Pf6N2E2_4433	0.32	-0.7
5,166,028	+		Pf6N2E2_4433	0.66	+1.3
5,166,028	+		Pf6N2E2_4433	0.66	+0.0
5,166,028	+		Pf6N2E2_4433	0.66	+0.2
5,166,029	-		Pf6N2E2_4433	0.66	-1.2
5,166,077	+		Pf6N2E2_4433	0.70	-0.1
5,166,077	+		Pf6N2E2_4433	0.70	-0.3
5,166,078	-		Pf6N2E2_4433	0.70	-1.1
5,166,103	+		Pf6N2E2_4433	0.72	-0.9
5,166,103	+		Pf6N2E2_4433	0.72	-0.0
5,166,104	-		Pf6N2E2_4433	0.72	-0.5
5,166,127	+		Pf6N2E2_4433	0.74	-0.0