Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4414

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
5,147,493	+				+2.9
5,147,493	+				+0.1
5,147,494	-				-0.2
5,147,610	+				+1.1
5,147,611	-				+1.3
5,147,611	-				+1.3
5,147,745	+				-0.9
5,147,745	+				-0.6
5,147,746	-				-0.2
5,147,746	-				+1.1
5,147,746	-				-1.8
5,147,748	-				+0.7
5,147,761	+				-0.9
5,147,761	+				-1.9
5,147,777	+				-0.8
5,147,777	+				-1.0
5,147,777	+				-1.0
5,147,777	+				-1.1
5,147,777	+				-0.8
5,147,778	-				+1.2
5,147,778	-				-1.0
5,147,778	-				+1.3
5,147,778	-				-0.5
5,147,778	-				+0.6
5,147,778	-				+0.2
5,147,778	-				+0.4
5,147,780	+				-0.8
5,147,780	+				+0.3
5,147,809	+				+0.4
5,147,810	-				+0.6
5,147,839	+				-0.4
5,147,839	+				-0.1
5,147,839	+				-0.4
5,147,839	+				-1.9
5,147,839	+				+0.0
5,147,839	+				-0.9
5,147,839	+				-1.3
5,147,839	+				-1.4
5,147,839	+				+0.7
5,147,839	+				-0.1
5,147,839	+				-0.8
5,147,839	+				-1.0
5,147,840	-				+1.3
5,147,840	-				+1.3
5,147,840	-				+1.3
5,147,840	-				+1.3
5,147,840	-				+1.3
5,147,840	-				-1.3
5,147,971	+		Pf6N2E2_4413	0.31	+0.3
5,147,971	+		Pf6N2E2_4413	0.31	+0.3
5,147,971	+		Pf6N2E2_4413	0.31	-0.9
5,147,971	+		Pf6N2E2_4413	0.31	-1.9
5,147,971	+		Pf6N2E2_4413	0.31	-0.3
5,147,971	+		Pf6N2E2_4413	0.31	+0.5
5,147,972	-		Pf6N2E2_4413	0.31	+1.3
5,147,972	-		Pf6N2E2_4413	0.31	-1.0
5,147,972	-		Pf6N2E2_4413	0.31	+1.3
5,148,015	+		Pf6N2E2_4413	0.41	-0.6
5,148,015	+		Pf6N2E2_4413	0.41	-0.4
5,148,015	+		Pf6N2E2_4413	0.41	-0.3
5,148,015	+		Pf6N2E2_4413	0.41	+0.0
5,148,015	+		Pf6N2E2_4413	0.41	-0.9
5,148,015	+		Pf6N2E2_4413	0.41	-2.2
5,148,071	+		Pf6N2E2_4413	0.54	-0.9
5,148,071	+		Pf6N2E2_4413	0.54	-1.0
5,148,072	-		Pf6N2E2_4413	0.54	+1.3
5,148,194	+		Pf6N2E2_4413	0.83	-0.7
5,148,195	-		Pf6N2E2_4413	0.83	+1.3
5,148,248	+				-0.2
5,148,249	-				+1.3
5,148,249	-				+1.3
5,148,249	-				+1.3
5,148,263	+				-0.4
5,148,330	+				-1.0
5,148,332	+				-1.4
5,148,332	+				+0.1
5,148,332	+				-0.5
5,148,332	+				-1.2
5,148,332	+				-1.2
5,148,333	-				+1.3
5,148,333	-				+1.3
5,148,336	+				-1.0
5,148,336	+				-0.6
5,148,336	+				+0.3
5,148,336	+				-0.9
5,148,336	+				-0.4
5,148,336	+				-0.6
5,148,336	+				-0.7
5,148,336	+				-1.2
5,148,337	-				-0.3
5,148,337	-				+1.3
5,148,362	+				+2.9
5,148,363	-				+1.3
5,148,363	-				+1.0
5,148,405	+		Pf6N2E2_4414	0.11	+1.3
5,148,405	+		Pf6N2E2_4414	0.11	-0.3
5,148,406	-		Pf6N2E2_4414	0.12	-0.7
5,148,406	-		Pf6N2E2_4414	0.12	-0.3
5,148,543	+		Pf6N2E2_4414	0.54	-0.3
5,148,671	+				-0.7
5,148,671	+				+1.3
5,148,671	+				+0.5
5,148,671	+				-0.3
5,148,671	+				+1.3
5,148,685	+				+1.8
5,148,685	+				+1.1
5,148,686	-				-0.3
5,148,693	+				-0.7
5,148,837	+				+0.9
5,148,837	+				-0.1
5,148,837	+				+0.4
5,148,837	+				-0.4
5,148,838	-				-0.0
5,148,927	-				+0.7
5,149,180	-		Pf6N2E2_4415	0.40	-1.3
5,149,180	-		Pf6N2E2_4415	0.40	-0.7
5,149,523	+		Pf6N2E2_4415	0.89	-0.7
5,149,523	+		Pf6N2E2_4415	0.89	+0.9
5,149,523	+		Pf6N2E2_4415	0.89	+0.3
5,149,685	+				+1.3