Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4129

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
4,806,617	+		Pf6N2E2_4127	0.34	-0.1
4,806,683	+		Pf6N2E2_4127	0.41	-0.3
4,806,683	+		Pf6N2E2_4127	0.41	+0.3
4,806,684	-		Pf6N2E2_4127	0.41	-1.0
4,806,684	-		Pf6N2E2_4127	0.41	-0.2
4,806,851	+		Pf6N2E2_4127	0.58	+0.4
4,806,851	+		Pf6N2E2_4127	0.58	-1.5
4,806,851	+		Pf6N2E2_4127	0.58	-0.1
4,806,851	+		Pf6N2E2_4127	0.58	-0.8
4,806,851	+		Pf6N2E2_4127	0.58	-0.8
4,806,851	+		Pf6N2E2_4127	0.58	-0.1
4,806,852	-		Pf6N2E2_4127	0.58	-1.5
4,806,852	-		Pf6N2E2_4127	0.58	-0.2
4,806,852	-		Pf6N2E2_4127	0.58	+0.0
4,806,852	-		Pf6N2E2_4127	0.58	+0.1
4,806,869	+		Pf6N2E2_4127	0.60	-0.2
4,806,869	+		Pf6N2E2_4127	0.60	+0.8
4,806,869	+		Pf6N2E2_4127	0.60	-0.4
4,806,870	-		Pf6N2E2_4127	0.60	+0.3
4,806,955	+		Pf6N2E2_4127	0.69	-1.1
4,806,974	+		Pf6N2E2_4127	0.71	+1.3
4,806,974	+		Pf6N2E2_4127	0.71	+0.6
4,806,975	-		Pf6N2E2_4127	0.71	+0.9
4,807,119	-		Pf6N2E2_4127	0.86	-0.2
4,807,121	+		Pf6N2E2_4127	0.86	-0.4
4,807,121	+		Pf6N2E2_4127	0.86	-0.9
4,807,122	-		Pf6N2E2_4127	0.86	-0.7
4,807,122	-		Pf6N2E2_4127	0.86	-0.4
4,807,122	-		Pf6N2E2_4127	0.86	-0.4
4,807,122	-		Pf6N2E2_4127	0.86	+0.3
4,807,196	+				-0.0
4,807,205	+				+0.3
4,807,206	-				+0.0
4,807,206	-				-0.7
4,807,206	-				-0.5
4,807,286	+				+0.3
4,807,286	+				-0.0
4,807,286	+				-0.4
4,807,286	+				+1.3
4,807,286	+				-0.2
4,807,287	-				-0.3
4,807,287	-				-0.2
4,807,294	+				+0.6
4,807,295	-				+0.3
4,807,295	-				+0.4
4,807,295	-				+0.7
4,807,452	+		Pf6N2E2_4128	0.56	+0.4
4,807,453	-		Pf6N2E2_4128	0.56	+0.3
4,807,453	-		Pf6N2E2_4128	0.56	-1.1
4,807,453	-		Pf6N2E2_4128	0.56	-1.7
4,807,475	+		Pf6N2E2_4128	0.64	-1.0
4,807,518	+		Pf6N2E2_4128	0.79	-0.8
4,807,518	+		Pf6N2E2_4128	0.79	-0.1
4,807,565	+				-1.2
4,808,524	+				+1.2
4,809,385	-				-0.3
4,809,389	+				-0.8
4,809,389	+				-1.0
4,809,453	+				+0.3