Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4047

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
4,727,119	+		Pf6N2E2_4046	0.53	+0.1
4,727,119	+		Pf6N2E2_4046	0.53	+0.2
4,727,119	+		Pf6N2E2_4046	0.53	-0.3
4,727,120	-		Pf6N2E2_4046	0.53	-0.2
4,727,138	+		Pf6N2E2_4046	0.54	+1.3
4,727,138	+		Pf6N2E2_4046	0.54	-0.7
4,727,139	-		Pf6N2E2_4046	0.54	+0.1
4,727,139	-		Pf6N2E2_4046	0.54	-0.9
4,727,167	+		Pf6N2E2_4046	0.56	+0.2
4,727,167	+		Pf6N2E2_4046	0.56	-0.6
4,727,167	+		Pf6N2E2_4046	0.56	+0.3
4,727,168	-		Pf6N2E2_4046	0.56	-0.9
4,727,168	-		Pf6N2E2_4046	0.56	-0.4
4,727,168	-		Pf6N2E2_4046	0.56	-0.6
4,727,269	+		Pf6N2E2_4046	0.61	-0.2
4,727,269	+		Pf6N2E2_4046	0.61	-0.2
4,727,281	+		Pf6N2E2_4046	0.62	+0.0
4,727,281	+		Pf6N2E2_4046	0.62	+0.5
4,727,281	+		Pf6N2E2_4046	0.62	+0.2
4,727,281	+		Pf6N2E2_4046	0.62	+0.9
4,727,281	+		Pf6N2E2_4046	0.62	-0.1
4,727,282	-		Pf6N2E2_4046	0.62	-0.4
4,727,282	-		Pf6N2E2_4046	0.62	-1.0
4,727,282	-		Pf6N2E2_4046	0.62	-0.7
4,727,282	-		Pf6N2E2_4046	0.62	-0.6
4,727,282	-		Pf6N2E2_4046	0.62	-0.1
4,727,282	-		Pf6N2E2_4046	0.62	-1.0
4,727,284	+		Pf6N2E2_4046	0.62	-1.2
4,727,284	+		Pf6N2E2_4046	0.62	-1.9
4,727,284	+		Pf6N2E2_4046	0.62	-0.1
4,727,284	+		Pf6N2E2_4046	0.62	-0.8
4,727,284	+		Pf6N2E2_4046	0.62	+0.8
4,727,284	+		Pf6N2E2_4046	0.62	-0.5
4,727,284	+		Pf6N2E2_4046	0.62	+0.4
4,727,284	+		Pf6N2E2_4046	0.62	-0.1
4,727,285	-		Pf6N2E2_4046	0.62	-0.7
4,727,285	-		Pf6N2E2_4046	0.62	+1.3
4,727,285	-		Pf6N2E2_4046	0.62	+0.8
4,727,285	-		Pf6N2E2_4046	0.62	+0.2
4,727,285	-		Pf6N2E2_4046	0.62	+1.3
4,727,298	+		Pf6N2E2_4046	0.62	+0.5
4,727,298	+		Pf6N2E2_4046	0.62	-0.5
4,727,298	+		Pf6N2E2_4046	0.62	+1.0
4,727,299	-		Pf6N2E2_4046	0.63	+0.5
4,727,299	-		Pf6N2E2_4046	0.63	+0.3
4,727,521	+		Pf6N2E2_4046	0.74	-0.0
4,727,521	+		Pf6N2E2_4046	0.74	-0.3
4,727,522	-		Pf6N2E2_4046	0.74	-0.8
4,727,522	-		Pf6N2E2_4046	0.74	-0.5
4,728,053	+				-0.2
4,728,054	-				+0.3
4,728,054	-				-1.2
4,728,405	-		Pf6N2E2_4047	0.35	+0.3
4,728,405	-		Pf6N2E2_4047	0.35	-1.7
4,728,405	-		Pf6N2E2_4047	0.35	-3.5
4,728,405	-		Pf6N2E2_4047	0.35	+1.3
4,728,405	-		Pf6N2E2_4047	0.35	+2.3
4,728,405	-		Pf6N2E2_4047	0.35	-2.6
4,728,405	-		Pf6N2E2_4047	0.35	+0.3
4,728,405	-		Pf6N2E2_4047	0.35	-0.2
4,728,408	-		Pf6N2E2_4047	0.36	-2.1
4,728,408	-		Pf6N2E2_4047	0.36	-2.2
4,728,408	-		Pf6N2E2_4047	0.36	-0.7
4,728,409	+		Pf6N2E2_4047	0.36	-0.7
4,728,410	-		Pf6N2E2_4047	0.36	-2.4
4,728,410	-		Pf6N2E2_4047	0.36	-1.7
4,728,410	-		Pf6N2E2_4047	0.36	-3.7
4,728,410	-		Pf6N2E2_4047	0.36	-3.2
4,728,410	-		Pf6N2E2_4047	0.36	+1.3
4,728,410	-		Pf6N2E2_4047	0.36	-3.2
4,728,410	-		Pf6N2E2_4047	0.36	-2.4
4,728,410	-		Pf6N2E2_4047	0.36	-2.9
4,728,410	-		Pf6N2E2_4047	0.36	-1.7
4,728,627	-		Pf6N2E2_4047	0.63	-2.5
4,728,627	-		Pf6N2E2_4047	0.63	-0.7
4,729,157	-		Pf6N2E2_4048	0.18	-1.0
4,729,157	-		Pf6N2E2_4048	0.18	-1.0
4,729,294	-		Pf6N2E2_4048	0.30	-2.2
4,729,294	-		Pf6N2E2_4048	0.30	-1.0
4,729,571	-		Pf6N2E2_4048	0.52	-1.8
4,729,571	-		Pf6N2E2_4048	0.52	-0.2
4,729,571	-		Pf6N2E2_4048	0.52	+0.3
4,729,571	-		Pf6N2E2_4048	0.52	-2.7
4,729,730	-		Pf6N2E2_4048	0.65	+0.3
4,729,730	-		Pf6N2E2_4048	0.65	-2.7
4,729,730	-		Pf6N2E2_4048	0.65	-1.8
4,729,730	-		Pf6N2E2_4048	0.65	-5.5
4,729,730	-		Pf6N2E2_4048	0.65	-3.3
4,729,907	-		Pf6N2E2_4048	0.79	-3.1
4,729,907	-		Pf6N2E2_4048	0.79	-3.9
4,729,907	-		Pf6N2E2_4048	0.79	-3.7
4,729,907	-		Pf6N2E2_4048	0.79	+1.3
4,729,907	-		Pf6N2E2_4048	0.79	-4.4
4,729,907	-		Pf6N2E2_4048	0.79	-2.4
4,729,928	-		Pf6N2E2_4048	0.81	-3.1