Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4028

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
4,699,513	+		Pf6N2E2_4027	0.42	-0.9
4,699,514	-		Pf6N2E2_4027	0.42	-1.6
4,699,819	+		Pf6N2E2_4027	0.62	+0.1
4,699,820	-		Pf6N2E2_4027	0.62	+0.1
4,700,021	+		Pf6N2E2_4027	0.75	-0.1
4,700,147	-		Pf6N2E2_4027	0.83	+1.0
4,700,173	+		Pf6N2E2_4027	0.85	+0.3
4,700,173	+		Pf6N2E2_4027	0.85	+0.4
4,700,173	+		Pf6N2E2_4027	0.85	+1.3
4,700,173	+		Pf6N2E2_4027	0.85	-0.8
4,700,173	+		Pf6N2E2_4027	0.85	-0.7
4,700,174	-		Pf6N2E2_4027	0.85	-0.2
4,700,174	-		Pf6N2E2_4027	0.85	+0.8
4,700,191	+		Pf6N2E2_4027	0.86	+0.1
4,700,192	-		Pf6N2E2_4027	0.86	-0.8
4,700,197	+		Pf6N2E2_4027	0.86	-0.7
4,700,197	+		Pf6N2E2_4027	0.86	-0.3
4,700,197	+		Pf6N2E2_4027	0.86	-1.1
4,700,197	+		Pf6N2E2_4027	0.86	-0.1
4,700,197	+		Pf6N2E2_4027	0.86	+0.6
4,700,198	-		Pf6N2E2_4027	0.86	+0.3
4,700,198	-		Pf6N2E2_4027	0.86	-0.2
4,700,198	-		Pf6N2E2_4027	0.86	-0.6
4,700,262	+				+0.8
4,700,262	+				-1.4
4,700,262	+				-0.0
4,700,262	+				-0.7
4,700,263	-				+0.1
4,700,404	+				+1.3
4,700,404	+				-1.0
4,700,404	+				+0.8
4,700,404	+				+0.5
4,700,405	-				-0.1
4,700,405	-				+0.2
4,700,480	+				+0.4
4,700,480	+				-0.7
4,700,481	-				+0.8
4,700,481	-				+0.9
4,700,481	-				-0.2
4,700,614	+		Pf6N2E2_4028	0.28	-0.2
4,700,614	+		Pf6N2E2_4028	0.28	+1.3
4,700,614	+		Pf6N2E2_4028	0.28	+0.2
4,700,614	+		Pf6N2E2_4028	0.28	-0.7
4,700,614	+		Pf6N2E2_4028	0.28	-0.2
4,700,614	+		Pf6N2E2_4028	0.28	-1.0
4,700,615	-		Pf6N2E2_4028	0.28	-0.4
4,700,615	-		Pf6N2E2_4028	0.28	-0.8
4,700,615	-		Pf6N2E2_4028	0.28	+0.4
4,700,615	-		Pf6N2E2_4028	0.28	+0.2
4,700,615	-		Pf6N2E2_4028	0.28	+0.2
4,700,737	+		Pf6N2E2_4028	0.52	+0.4
4,700,799	+		Pf6N2E2_4028	0.64	-0.7
4,700,799	+		Pf6N2E2_4028	0.64	-0.3
4,700,800	-		Pf6N2E2_4028	0.64	+0.4
4,700,800	-		Pf6N2E2_4028	0.64	-1.1
4,700,800	-		Pf6N2E2_4028	0.64	+0.4
4,700,895	+		Pf6N2E2_4028	0.83	-2.8
4,700,895	+		Pf6N2E2_4028	0.83	+0.1
4,700,896	-		Pf6N2E2_4028	0.83	+0.5
4,700,896	-		Pf6N2E2_4028	0.83	-0.2
4,700,896	-		Pf6N2E2_4028	0.83	+0.7
4,700,896	-		Pf6N2E2_4028	0.83	+1.1
4,700,896	-		Pf6N2E2_4028	0.83	-0.0
4,700,896	-		Pf6N2E2_4028	0.83	+0.6
4,700,896	-		Pf6N2E2_4028	0.83	-1.0
4,700,896	-		Pf6N2E2_4028	0.83	+0.6
4,700,896	-		Pf6N2E2_4028	0.83	-0.6
4,700,896	-		Pf6N2E2_4028	0.83	+0.1
4,700,918	+		Pf6N2E2_4028	0.88	-0.9
4,700,919	-		Pf6N2E2_4028	0.88	-0.2
4,700,919	-		Pf6N2E2_4028	0.88	+1.0
4,700,919	-		Pf6N2E2_4028	0.88	-0.2
4,700,972	-				-0.7
4,701,068	-				-0.2
4,701,068	-				-0.1
4,701,068	-				+1.0
4,701,356	+		Pf6N2E2_4029	0.28	+0.9
4,701,380	+		Pf6N2E2_4029	0.30	-1.9
4,701,518	+		Pf6N2E2_4029	0.40	-0.1
4,701,519	-		Pf6N2E2_4029	0.40	+0.6
4,701,519	-		Pf6N2E2_4029	0.40	-0.2
4,701,727	+		Pf6N2E2_4029	0.55	-0.1
4,701,810	-		Pf6N2E2_4029	0.61	-0.3
4,701,860	+		Pf6N2E2_4029	0.65	-0.2
4,701,860	+		Pf6N2E2_4029	0.65	+0.1
4,701,861	-		Pf6N2E2_4029	0.65	-0.6