Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3750

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
4,364,765	+		Pf6N2E2_3749	0.59	+0.7
4,364,765	+		Pf6N2E2_3749	0.59	+0.5
4,364,766	-		Pf6N2E2_3749	0.59	-0.5
4,364,826	+		Pf6N2E2_3749	0.63	-0.5
4,364,826	+		Pf6N2E2_3749	0.63	+0.4
4,364,827	-		Pf6N2E2_3749	0.63	-0.2
4,364,827	-		Pf6N2E2_3749	0.63	+1.8
4,364,892	+		Pf6N2E2_3749	0.68	+0.5
4,364,966	+		Pf6N2E2_3749	0.73	+0.6
4,364,967	-		Pf6N2E2_3749	0.73	+0.2
4,364,967	-		Pf6N2E2_3749	0.73	-0.3
4,364,967	-		Pf6N2E2_3749	0.73	-0.2
4,364,967	-		Pf6N2E2_3749	0.73	+0.1
4,364,999	+		Pf6N2E2_3749	0.75	+0.6
4,364,999	+		Pf6N2E2_3749	0.75	-0.1
4,364,999	+		Pf6N2E2_3749	0.75	+0.7
4,365,000	-		Pf6N2E2_3749	0.75	-1.0
4,365,000	-		Pf6N2E2_3749	0.75	+0.2
4,365,180	+		Pf6N2E2_3749	0.87	-0.3
4,365,180	+		Pf6N2E2_3749	0.87	-0.7
4,365,180	+		Pf6N2E2_3749	0.87	-0.4
4,365,180	+		Pf6N2E2_3749	0.87	-1.4
4,365,181	-		Pf6N2E2_3749	0.87	-0.9
4,365,191	+		Pf6N2E2_3749	0.88	-2.2
4,365,211	+		Pf6N2E2_3749	0.89	-1.8
4,365,337	+				+0.3
4,365,337	+				+0.7
4,365,337	+				+1.3
4,365,337	+				+0.3
4,365,338	-				+0.3
4,365,338	-				+0.1
4,365,338	-				+0.2
4,365,338	-				-0.3
4,365,369	-				-1.9
4,365,369	-				+0.9
4,365,450	+				+0.3
4,365,450	+				-0.6
4,365,451	-				+0.3
4,365,451	-				+1.3
4,365,451	-				-0.8
4,365,469	+				-0.3
4,365,488	+				+0.6
4,365,489	-				-1.0
4,365,489	-				+0.6
4,365,489	-				-0.2
4,365,489	-				+0.3
4,365,489	-				-1.7
4,365,512	-				-0.3
4,365,542	+				-0.5
4,365,546	+				+1.3
4,365,626	+				+0.7
4,365,627	-				-0.8
4,366,851	-				+0.0
4,366,855	-				+0.7
4,366,855	-				-1.8
4,366,855	-				+0.6
4,366,878	-				+1.3
4,366,892	-				-0.9
4,366,892	-				-0.1
4,366,892	-				+0.1
4,366,892	-				-0.1
4,367,127	-				-4.4
4,367,378	+		Pf6N2E2_3751	0.27	-4.1
4,367,378	+		Pf6N2E2_3751	0.27	-2.8
4,367,379	-		Pf6N2E2_3751	0.27	-2.3
4,367,379	-		Pf6N2E2_3751	0.27	-3.0
4,367,456	+		Pf6N2E2_3751	0.32	-2.6
4,367,634	-		Pf6N2E2_3751	0.45	-3.7
4,367,675	+		Pf6N2E2_3751	0.48	-2.2
4,367,675	+		Pf6N2E2_3751	0.48	-1.9
4,367,675	+		Pf6N2E2_3751	0.48	-1.9
4,367,675	+		Pf6N2E2_3751	0.48	-1.5
4,367,675	+		Pf6N2E2_3751	0.48	-3.7
4,367,675	+		Pf6N2E2_3751	0.48	-3.6
4,367,675	+		Pf6N2E2_3751	0.48	-2.3
4,367,675	+		Pf6N2E2_3751	0.48	-2.0
4,367,675	+		Pf6N2E2_3751	0.48	-3.4
4,367,676	-		Pf6N2E2_3751	0.48	-3.7
4,367,676	-		Pf6N2E2_3751	0.48	-0.3
4,367,676	-		Pf6N2E2_3751	0.48	-2.6
4,367,676	-		Pf6N2E2_3751	0.48	-3.3
4,367,676	-		Pf6N2E2_3751	0.48	-3.9
4,367,676	-		Pf6N2E2_3751	0.48	-2.0
4,367,676	-		Pf6N2E2_3751	0.48	-5.1
4,367,676	-		Pf6N2E2_3751	0.48	-3.1
4,367,676	-		Pf6N2E2_3751	0.48	-5.0
4,367,681	+		Pf6N2E2_3751	0.48	-3.6
4,367,681	+		Pf6N2E2_3751	0.48	-1.9
4,367,681	+		Pf6N2E2_3751	0.48	-2.6
4,367,681	+		Pf6N2E2_3751	0.48	-2.7
4,367,681	+		Pf6N2E2_3751	0.48	-3.4
4,367,681	+		Pf6N2E2_3751	0.48	-0.7
4,367,681	+		Pf6N2E2_3751	0.48	-2.9
4,367,682	-		Pf6N2E2_3751	0.48	-2.4
4,367,682	-		Pf6N2E2_3751	0.48	-0.7
4,367,682	-		Pf6N2E2_3751	0.48	-2.6
4,367,682	-		Pf6N2E2_3751	0.48	-4.1
4,367,711	+		Pf6N2E2_3751	0.50	-0.3
4,367,711	+		Pf6N2E2_3751	0.50	-2.2
4,367,711	+		Pf6N2E2_3751	0.50	-3.8
4,367,712	-		Pf6N2E2_3751	0.50	-4.7