Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3658

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
4,259,846	-				-1.7
4,259,861	-				-1.6
4,259,953	-				+0.3
4,259,999	-				-1.2
4,259,999	-				-1.9
4,259,999	-				+0.3
4,260,255	-		Pf6N2E2_3658	0.27	+1.3
4,260,255	-		Pf6N2E2_3658	0.27	+1.3
4,260,277	-		Pf6N2E2_3658	0.29	+1.3
4,260,326	-		Pf6N2E2_3658	0.33	+0.3
4,260,339	-		Pf6N2E2_3658	0.34	-2.5
4,260,339	-		Pf6N2E2_3658	0.34	+1.3
4,260,372	-		Pf6N2E2_3658	0.37	+1.3
4,260,390	-		Pf6N2E2_3658	0.39	+1.3
4,260,760	-		Pf6N2E2_3658	0.71	+1.3
4,260,831	-		Pf6N2E2_3658	0.78	+1.3
4,260,831	-		Pf6N2E2_3658	0.78	-1.3
4,260,831	-		Pf6N2E2_3658	0.78	+1.3
4,260,834	+		Pf6N2E2_3658	0.78	-2.5
4,260,834	+		Pf6N2E2_3658	0.78	-0.6
4,260,834	+		Pf6N2E2_3658	0.78	-1.2
4,260,834	+		Pf6N2E2_3658	0.78	-1.8
4,260,834	+		Pf6N2E2_3658	0.78	-2.4
4,260,834	+		Pf6N2E2_3658	0.78	-2.7
4,260,834	+		Pf6N2E2_3658	0.78	-2.0
4,260,834	+				+0.3
4,260,834	+		Pf6N2E2_3658	0.78	+0.0
4,260,835	-		Pf6N2E2_3658	0.78	+1.3
4,260,835	-		Pf6N2E2_3658	0.78	+1.3
4,260,835	-		Pf6N2E2_3658	0.78	-0.3
4,260,835	-		Pf6N2E2_3658	0.78	+1.3
4,260,835	-		Pf6N2E2_3658	0.78	+1.3
4,260,835	-		Pf6N2E2_3658	0.78	-0.7
4,260,835	-		Pf6N2E2_3658	0.78	+1.3
4,260,835	-		Pf6N2E2_3658	0.78	-1.6
4,260,945	-		Pf6N2E2_3658	0.88	+0.3
4,260,998	+				-0.0
4,260,998	+				-0.0
4,260,998	+				-2.3
4,260,999	-				+1.3
4,260,999	-				+1.3
4,261,052	+				+0.6
4,261,053	-				+1.3
4,261,053	-				+0.3
4,261,105	+				-1.7
4,261,131	+				-1.9
4,261,177	+				+0.3
4,261,178	-				+1.3
4,261,202	-				+1.3
4,261,210	-				+1.3
4,261,220	-				-1.0
4,261,224	+				-2.7
4,261,225	-				-0.8
4,261,238	-				+0.1
4,261,238	-				+0.3
4,261,238	-				+1.3
4,261,238	-				+1.3
4,261,244	+		Pf6N2E2_3659	0.10	-1.7
4,261,245	-		Pf6N2E2_3659	0.10	+0.3
4,261,331	+		Pf6N2E2_3659	0.18	+0.1
4,261,331	+		Pf6N2E2_3659	0.18	-0.5
4,261,332	-		Pf6N2E2_3659	0.18	+1.3
4,261,332	-		Pf6N2E2_3659	0.18	+1.3
4,261,332	-		Pf6N2E2_3659	0.18	+1.3
4,261,332	-		Pf6N2E2_3659	0.18	+1.3
4,261,358	-		Pf6N2E2_3659	0.21	-1.0
4,261,358	-		Pf6N2E2_3659	0.21	+0.3
4,261,454	-		Pf6N2E2_3659	0.29	+1.3
4,261,752	+		Pf6N2E2_3659	0.56	-0.9
4,261,759	-		Pf6N2E2_3659	0.57	-1.0
4,261,759	-		Pf6N2E2_3659	0.57	+1.3
4,261,759	-		Pf6N2E2_3659	0.57	+1.3
4,261,759	-		Pf6N2E2_3659	0.57	-0.3
4,261,759	-		Pf6N2E2_3659	0.57	+0.3
4,261,759	-		Pf6N2E2_3659	0.57	-0.3
4,261,800	+		Pf6N2E2_3659	0.61	-0.3
4,262,000	+		Pf6N2E2_3659	0.79	-1.5