Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3489

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
4,069,424	+				-2.6
4,069,424	+				+2.4
4,069,425	-				-3.2
4,069,425	-				-0.4
4,069,463	+				-0.6
4,069,464	-				-0.2
4,069,464	-				-2.2
4,069,464	-				-0.7
4,069,465	+				-1.2
4,069,465	+				-2.6
4,069,466	-				-2.6
4,069,466	-				-0.2
4,069,663	+		Pf6N2E2_3488	0.13	+0.3
4,069,663	+		Pf6N2E2_3488	0.13	-0.5
4,069,666	+		Pf6N2E2_3488	0.14	+0.4
4,069,666	+		Pf6N2E2_3488	0.14	+1.4
4,069,666	+		Pf6N2E2_3488	0.14	+0.6
4,069,667	-		Pf6N2E2_3488	0.14	-0.2
4,069,667	-		Pf6N2E2_3488	0.14	-2.3
4,069,667	-		Pf6N2E2_3488	0.14	+0.4
4,069,667	-		Pf6N2E2_3488	0.14	-0.2
4,069,723	+		Pf6N2E2_3488	0.28	+0.0
4,070,050	-				-0.3
4,070,066	+				+2.4
4,070,088	+				+3.0
4,070,094	+				+0.2
4,070,094	+				+0.6
4,070,094	+				-0.4
4,070,094	+				+0.2
4,070,095	-				-1.3
4,070,095	-				-0.6
4,070,095	-				+0.8
4,070,095	-				-0.5
4,070,269	+				+0.1
4,070,269	+				+0.4
4,070,269	+				-0.3
4,070,269	+				+0.0
4,070,270	-				-0.2
4,070,284	-				+0.4
4,070,510	+		Pf6N2E2_3489	0.22	+0.3
4,070,510	+		Pf6N2E2_3489	0.22	+0.3
4,070,510	+		Pf6N2E2_3489	0.22	+0.4
4,070,510	+		Pf6N2E2_3489	0.22	-0.8
4,070,511	-		Pf6N2E2_3489	0.22	-0.4
4,070,511	-		Pf6N2E2_3489	0.22	-0.2
4,070,511	-		Pf6N2E2_3489	0.22	-0.0
4,070,511	-		Pf6N2E2_3489	0.22	-0.0
4,070,534	+		Pf6N2E2_3489	0.25	+0.0
4,070,534	+		Pf6N2E2_3489	0.25	+0.9
4,070,535	-		Pf6N2E2_3489	0.25	+0.1
4,070,535	-		Pf6N2E2_3489	0.25	+0.3
4,070,573	+		Pf6N2E2_3489	0.29	+0.9
4,070,574	-		Pf6N2E2_3489	0.29	-0.4
4,070,756	+		Pf6N2E2_3489	0.49	+0.8
4,070,757	-		Pf6N2E2_3489	0.50	+1.1
4,070,757	-		Pf6N2E2_3489	0.50	-0.1
4,070,765	+		Pf6N2E2_3489	0.50	-0.6
4,070,765	+		Pf6N2E2_3489	0.50	+0.4
4,070,873	+		Pf6N2E2_3489	0.63	+0.6
4,070,874	-		Pf6N2E2_3489	0.63	+1.3
4,071,030	-		Pf6N2E2_3489	0.80	+0.5
4,071,071	+		Pf6N2E2_3489	0.85	+0.0
4,071,072	-		Pf6N2E2_3489	0.85	+0.6
4,071,072	-		Pf6N2E2_3489	0.85	+0.7
4,071,072	-		Pf6N2E2_3489	0.85	+0.5
4,071,072	-		Pf6N2E2_3489	0.85	+1.0
4,071,088	+		Pf6N2E2_3489	0.87	+0.7
4,071,088	+		Pf6N2E2_3489	0.87	+0.1
4,071,088	+		Pf6N2E2_3489	0.87	+0.7
4,071,089	-		Pf6N2E2_3489	0.87	+0.3
4,071,089	-		Pf6N2E2_3489	0.87	-1.0
4,071,089	-		Pf6N2E2_3489	0.87	-0.6
4,071,089	-		Pf6N2E2_3489	0.87	+0.3
4,071,089	-		Pf6N2E2_3489	0.87	+0.5
4,071,089	-		Pf6N2E2_3489	0.87	-0.0
4,071,113	+		Pf6N2E2_3489	0.89	-0.1
4,071,113	+		Pf6N2E2_3489	0.89	-0.4
4,071,113	+		Pf6N2E2_3489	0.89	-0.3
4,071,114	-		Pf6N2E2_3489	0.89	-0.6
4,071,114	-		Pf6N2E2_3489	0.89	+0.8
4,071,114	-		Pf6N2E2_3489	0.89	+0.3
4,071,114	-		Pf6N2E2_3489	0.89	+0.3
4,071,114	-		Pf6N2E2_3489	0.89	-0.6
4,071,114	-		Pf6N2E2_3489	0.89	+0.4
4,071,114	-		Pf6N2E2_3489	0.89	+0.1
4,071,114	-		Pf6N2E2_3489	0.89	+1.2
4,071,129	+				-0.2
4,071,129	+				+1.0
4,071,130	-				+0.4
4,071,215	+				+0.4
4,071,215	+				+0.4
4,071,215	+				+0.6
4,071,215	+				+1.0
4,071,215	+				-1.0
4,071,215	+				+0.3
4,071,216	-				+1.0
4,071,230	-				-0.2
4,071,230	-				-0.9
4,071,230	-				-0.2
4,071,230	-				+0.9
4,071,232	+				+0.8
4,071,258	-				-0.2
4,071,259	+				-0.3
4,071,297	+				-0.6
4,071,297	+				+0.8
4,071,297	+				-0.1
4,071,297	+				+3.0
4,071,297	+				+0.2
4,071,298	-				-1.1
4,071,298	-				-1.4
4,071,298	-				-0.4
4,071,298	-				-0.0
4,071,419	+				-0.4
4,071,431	+				-0.2
4,071,431	+				+0.7
4,071,431	+				+0.2
4,071,431	+				+0.5
4,071,432	-				-2.3
4,071,432	-				-1.0
4,071,432	-				-0.4
4,071,432	-				+0.0
4,071,474	-				-2.3
4,071,523	+				+1.4
4,071,523	+				-0.1
4,071,523	+				+2.0
4,071,668	+		Pf6N2E2_3490	0.28	+1.4
4,071,668	+		Pf6N2E2_3490	0.28	+0.5
4,071,669	-		Pf6N2E2_3490	0.28	-1.1
4,071,731	+		Pf6N2E2_3490	0.36	+0.2
4,071,731	+		Pf6N2E2_3490	0.36	+0.5
4,071,732	-		Pf6N2E2_3490	0.36	-0.6
4,071,961	+		Pf6N2E2_3490	0.65	+1.4
4,071,961	+		Pf6N2E2_3490	0.65	-1.4
4,071,961	+		Pf6N2E2_3490	0.65	+0.3
4,071,961	+		Pf6N2E2_3490	0.65	-0.7
4,071,961	+		Pf6N2E2_3490	0.65	+0.0
4,071,961	+		Pf6N2E2_3490	0.65	-0.2
4,071,961	+		Pf6N2E2_3490	0.65	+0.2
4,071,961	+		Pf6N2E2_3490	0.65	+1.4
4,071,961	+		Pf6N2E2_3490	0.65	+1.4
4,071,961	+		Pf6N2E2_3490	0.65	-0.5
4,071,962	-		Pf6N2E2_3490	0.65	-0.1
4,071,962	-		Pf6N2E2_3490	0.65	+0.4
4,071,962	-		Pf6N2E2_3490	0.65	-0.1
4,071,962	-		Pf6N2E2_3490	0.65	-0.4
4,071,962	-		Pf6N2E2_3490	0.65	-0.1
4,071,962	-		Pf6N2E2_3490	0.65	-1.0
4,071,962	-		Pf6N2E2_3490	0.65	-2.1
4,071,962	-		Pf6N2E2_3490	0.65	-0.9
4,071,962	-		Pf6N2E2_3490	0.65	-1.0
4,071,962	-		Pf6N2E2_3490	0.65	-0.9
4,071,962	-		Pf6N2E2_3490	0.65	+1.4
4,071,962	-		Pf6N2E2_3490	0.65	-1.0
4,071,962	-		Pf6N2E2_3490	0.65	-0.6
4,071,962	-		Pf6N2E2_3490	0.65	-0.6
4,071,962	-		Pf6N2E2_3490	0.65	-0.1
4,071,962	-		Pf6N2E2_3490	0.65	+0.7
4,071,962	-		Pf6N2E2_3490	0.65	-0.5
4,071,962	-		Pf6N2E2_3490	0.65	-0.2
4,072,071	+		Pf6N2E2_3490	0.79	-0.6
4,072,097	-		Pf6N2E2_3490	0.82	-1.1