Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2422

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
2,871,862	+		Pf6N2E2_2419	0.72	+0.6
2,871,948	+		Pf6N2E2_2419	0.81	-0.4
2,871,948	+		Pf6N2E2_2419	0.81	-0.0
2,871,949	-		Pf6N2E2_2419	0.81	+0.9
2,871,949	-		Pf6N2E2_2419	0.81	-0.1
2,871,949	-		Pf6N2E2_2419	0.81	+0.1
2,871,949	-		Pf6N2E2_2419	0.81	+0.8
2,871,949	-		Pf6N2E2_2419	0.81	+0.4
2,872,195	-		Pf6N2E2_2420	0.27	+1.2
2,872,195	-		Pf6N2E2_2420	0.27	+0.2
2,872,281	+		Pf6N2E2_2420	0.78	-1.4
2,872,282	-		Pf6N2E2_2420	0.79	+0.1
2,872,359	-				+1.4
2,872,386	+				-0.6
2,872,387	-				+0.4
2,872,387	-				-0.6
2,872,400	+				-0.1
2,872,400	+				-1.2
2,872,401	-				+0.6
2,872,401	-				+1.1
2,872,442	+				-0.1
2,872,442	+				-1.4
2,872,442	+				+0.2
2,872,472	+				-0.7
2,872,473	-				+0.0
2,872,482	+				-0.0
2,872,482	+				+0.3
2,872,482	+				+0.6
2,872,482	+				+0.2
2,872,482	+				+0.4
2,872,483	-				+0.0
2,872,483	-				+1.2
2,872,532	+				+0.1
2,872,533	-				+0.5
2,872,559	+				-1.1
2,872,560	-				-0.2
2,872,620	+		Pf6N2E2_2421	0.20	+1.4
2,872,620	+		Pf6N2E2_2421	0.20	+0.1
2,872,620	+		Pf6N2E2_2421	0.20	-1.0
2,872,620	+		Pf6N2E2_2421	0.20	+0.2
2,872,621	-		Pf6N2E2_2421	0.21	+1.2
2,872,621	-		Pf6N2E2_2421	0.21	-0.0
2,872,621	-		Pf6N2E2_2421	0.21	-0.4
2,872,621	-		Pf6N2E2_2421	0.21	-0.9
2,872,621	-		Pf6N2E2_2421	0.21	-0.3
2,872,657	+		Pf6N2E2_2421	0.39	+0.4
2,872,657	+		Pf6N2E2_2421	0.39	+0.3
2,872,657	+				+0.7
2,872,658	-		Pf6N2E2_2421	0.39	+1.4
2,872,683	+		Pf6N2E2_2421	0.52	+0.2
2,872,683	+		Pf6N2E2_2421	0.52	+0.7
2,872,684	-		Pf6N2E2_2421	0.53	-0.5
2,872,684	-		Pf6N2E2_2421	0.53	+1.6
2,873,003	+		Pf6N2E2_2422	0.14	-0.8
2,873,004	+		Pf6N2E2_2422	0.14	+1.4
2,873,004	+		Pf6N2E2_2422	0.14	-3.6
2,873,004	+		Pf6N2E2_2422	0.14	-3.1
2,873,005	-		Pf6N2E2_2422	0.14	-0.5
2,873,005	-		Pf6N2E2_2422	0.14	-3.3
2,873,078	-		Pf6N2E2_2422	0.20	-0.6
2,873,093	+		Pf6N2E2_2422	0.21	+1.4
2,873,093	+		Pf6N2E2_2422	0.21	-2.6
2,873,093	+		Pf6N2E2_2422	0.21	-2.7
2,873,100	+		Pf6N2E2_2422	0.22	+0.8
2,873,159	+		Pf6N2E2_2422	0.26	-1.9
2,873,159	+		Pf6N2E2_2422	0.26	+0.4
2,873,178	+		Pf6N2E2_2422	0.28	-0.2
2,873,351	+		Pf6N2E2_2422	0.42	-1.2
2,873,369	-		Pf6N2E2_2422	0.44	-0.2
2,873,435	-		Pf6N2E2_2422	0.49	-0.6
2,873,435	-		Pf6N2E2_2422	0.49	-0.7
2,873,436	+		Pf6N2E2_2422	0.49	-2.9
2,873,436	+		Pf6N2E2_2422	0.49	-1.9
2,873,436	+		Pf6N2E2_2422	0.49	-0.6
2,873,436	+		Pf6N2E2_2422	0.49	-2.6
2,873,436	+		Pf6N2E2_2422	0.49	-1.2
2,873,437	-		Pf6N2E2_2422	0.49	+1.4
2,873,437	-		Pf6N2E2_2422	0.49	+1.4
2,873,437	-		Pf6N2E2_2422	0.49	-1.1
2,873,437	-		Pf6N2E2_2422	0.49	-1.5
2,873,437	-		Pf6N2E2_2422	0.49	-0.2
2,873,437	-		Pf6N2E2_2422	0.49	-2.0
2,873,857	-		Pf6N2E2_2422	0.83	-2.1
2,873,857	-		Pf6N2E2_2422	0.83	-1.7
2,873,867	-		Pf6N2E2_2422	0.84	-1.7
2,874,186	+		Pf6N2E2_2423	0.26	-2.6
2,874,186	+		Pf6N2E2_2423	0.26	+0.0
2,874,186	+		Pf6N2E2_2423	0.26	-1.6
2,874,187	-		Pf6N2E2_2423	0.26	-1.1
2,874,187	-		Pf6N2E2_2423	0.26	-0.4
2,874,418	+		Pf6N2E2_2423	0.69	-1.9
2,874,418	+		Pf6N2E2_2423	0.69	-1.5
2,874,418	+		Pf6N2E2_2423	0.69	-2.7
2,874,419	-		Pf6N2E2_2423	0.69	+0.6
2,874,501	-		Pf6N2E2_2423	0.84	-0.2
2,874,501	-		Pf6N2E2_2423	0.84	-0.4
2,874,515	+		Pf6N2E2_2423	0.87	-1.9
2,874,521	+		Pf6N2E2_2423	0.88	+0.4
2,874,521	+		Pf6N2E2_2423	0.88	+1.4
2,874,521	+		Pf6N2E2_2423	0.88	+0.0
2,874,522	-		Pf6N2E2_2423	0.88	+0.2
2,874,564	+				-2.3
2,874,564	+				-0.2
2,874,564	+				-1.7
2,874,564	+				-2.3
2,874,565	-				-1.2
2,874,565	-				+0.7
2,874,565	-				-0.3
2,874,620	+				-1.3
2,874,620	+				-1.4
2,874,620	+				-0.6
2,874,620	+				-1.4
2,874,620	+				-2.9
2,874,620	+				-1.2
2,874,620	+				-2.1
2,874,620	+				-0.2
2,874,621	-				-0.9
2,874,621	-				+0.0
2,874,621	-				+0.5
2,874,621	-				+0.1
2,874,621	-				-1.8
2,874,621	-				-1.3
2,874,621	-				+0.2
2,874,621	-				-0.7
2,874,622	+				+1.0
2,874,622	+				-1.2
2,874,623	-				-0.9
2,874,840	-		Pf6N2E2_2424	0.29	+0.2
2,874,861	+		Pf6N2E2_2424	0.33	-1.8
2,874,861	+		Pf6N2E2_2424	0.33	-3.5
2,874,861	+		Pf6N2E2_2424	0.33	-2.4
2,874,862	-		Pf6N2E2_2424	0.33	-2.9
2,874,951	+		Pf6N2E2_2424	0.48	-3.4
2,874,952	-		Pf6N2E2_2424	0.48	-1.3