Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2146

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
2,551,122	+		Pf6N2E2_2145	0.32	-0.9
2,551,123	-		Pf6N2E2_2145	0.32	+0.5
2,551,193	-		Pf6N2E2_2145	0.39	-0.4
2,551,207	+		Pf6N2E2_2145	0.40	-1.7
2,551,207	+		Pf6N2E2_2145	0.40	+0.1
2,551,207	+		Pf6N2E2_2145	0.40	+1.0
2,551,208	-		Pf6N2E2_2145	0.40	+0.5
2,551,208	-		Pf6N2E2_2145	0.40	-0.8
2,551,247	-		Pf6N2E2_2145	0.43	-0.1
2,551,247	-		Pf6N2E2_2145	0.43	+0.7
2,551,306	+		Pf6N2E2_2145	0.49	+2.5
2,551,306	+		Pf6N2E2_2145	0.49	+0.1
2,551,307	-		Pf6N2E2_2145	0.49	+0.7
2,551,477	+		Pf6N2E2_2145	0.64	-0.0
2,551,664	+		Pf6N2E2_2145	0.82	+0.0
2,551,696	+		Pf6N2E2_2145	0.84	+0.6
2,551,696	+		Pf6N2E2_2145	0.84	+1.5
2,551,697	-		Pf6N2E2_2145	0.85	+0.5
2,551,697	-		Pf6N2E2_2145	0.85	-0.4
2,551,697	-		Pf6N2E2_2145	0.85	-0.3
2,551,697	-		Pf6N2E2_2145	0.85	+0.1
2,551,697	-		Pf6N2E2_2145	0.85	-0.4
2,551,697	-		Pf6N2E2_2145	0.85	-0.1
2,551,697	-		Pf6N2E2_2145	0.85	+1.5
2,551,697	-		Pf6N2E2_2145	0.85	-0.3
2,551,697	-		Pf6N2E2_2145	0.85	-0.1
2,551,697	-		Pf6N2E2_2145	0.85	-0.7
2,551,697	-		Pf6N2E2_2145	0.85	+0.3
2,551,697	-		Pf6N2E2_2145	0.85	+0.7
2,551,901	+				+1.2
2,551,901	+				-0.1
2,551,901	+				+0.3
2,551,901	+				+0.3
2,551,901	+				-0.1
2,551,901	+				+0.8
2,551,901	+				+1.5
2,551,901	+				+0.7
2,551,901	+				-1.1
2,551,902	-				+0.6
2,551,902	-				-0.3
2,551,924	+				-0.5
2,551,924	+				+1.5
2,552,022	+				-0.1
2,552,023	-				-1.0
2,552,076	-				-0.7
2,552,148	+		Pf6N2E2_2146	0.16	+1.5
2,552,149	-		Pf6N2E2_2146	0.17	+0.3
2,552,202	+		Pf6N2E2_2146	0.22	-0.0
2,552,203	-		Pf6N2E2_2146	0.22	-0.5
2,552,203	-		Pf6N2E2_2146	0.22	-0.3
2,552,355	+		Pf6N2E2_2146	0.38	-0.5
2,552,356	-		Pf6N2E2_2146	0.38	+0.6
2,552,356	-		Pf6N2E2_2146	0.38	+1.5
2,552,382	+		Pf6N2E2_2146	0.40	-0.0
2,552,383	-		Pf6N2E2_2146	0.41	+0.4
2,552,586	+		Pf6N2E2_2146	0.61	-0.3
2,552,754	+		Pf6N2E2_2146	0.79	+0.1
2,552,980	+				-0.2
2,552,980	+				-0.2
2,552,980	+				-0.8
2,552,980	+				-0.9
2,552,980	+				+0.5
2,552,981	-				+0.7
2,553,008	+				+0.7
2,553,008	+				+0.3
2,553,009	-				+0.8
2,553,034	+				+0.2
2,553,035	-				+0.7
2,553,057	-				-0.2
2,553,199	+		Pf6N2E2_2147	0.14	+0.2
2,553,199	+		Pf6N2E2_2147	0.14	-0.1
2,553,199	+		Pf6N2E2_2147	0.14	-0.2
2,553,199	+		Pf6N2E2_2147	0.14	-0.2
2,553,199	+		Pf6N2E2_2147	0.14	-0.1
2,553,199	+		Pf6N2E2_2147	0.14	+0.0
2,553,199	+		Pf6N2E2_2147	0.14	-0.3
2,553,199	+		Pf6N2E2_2147	0.14	-0.2
2,553,199	+		Pf6N2E2_2147	0.14	+0.8
2,553,199	+		Pf6N2E2_2147	0.14	+1.0
2,553,199	+		Pf6N2E2_2147	0.14	+0.5
2,553,200	-		Pf6N2E2_2147	0.14	+1.5
2,553,200	-		Pf6N2E2_2147	0.14	+0.2
2,553,200	-		Pf6N2E2_2147	0.14	+1.5
2,553,200	-		Pf6N2E2_2147	0.14	-0.7
2,553,200	-		Pf6N2E2_2147	0.14	-1.0
2,553,200	-		Pf6N2E2_2147	0.14	-0.0
2,553,200	-		Pf6N2E2_2147	0.14	-1.3
2,553,200	-		Pf6N2E2_2147	0.14	+0.3
2,553,200	-		Pf6N2E2_2147	0.14	-0.9
2,553,200	-		Pf6N2E2_2147	0.14	+0.9
2,553,200	-		Pf6N2E2_2147	0.14	-0.9
2,553,200	-		Pf6N2E2_2147	0.14	+0.8
2,553,200	-		Pf6N2E2_2147	0.14	-0.6
2,553,200	-		Pf6N2E2_2147	0.14	-0.1
2,553,200	-		Pf6N2E2_2147	0.14	+0.1
2,553,200	-		Pf6N2E2_2147	0.14	+0.0
2,553,200	-		Pf6N2E2_2147	0.14	+1.5
2,553,200	-		Pf6N2E2_2147	0.14	-0.5
2,553,728	+		Pf6N2E2_2147	0.76	+0.0
2,553,729	-		Pf6N2E2_2147	0.76	+0.5
2,553,904	+				+1.0
2,553,904	+				+1.5
2,553,904	+				+0.9
2,553,905	-				+0.5
2,553,905	-				-0.1
2,553,905	-				-0.9