Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1758

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
2,076,120	+		Pf6N2E2_1757	0.40	-0.9
2,076,120	+		Pf6N2E2_1757	0.40	-0.6
2,076,121	-		Pf6N2E2_1757	0.40	+1.4
2,076,123	+		Pf6N2E2_1757	0.40	-0.0
2,076,123	+		Pf6N2E2_1757	0.40	+0.7
2,076,123	+		Pf6N2E2_1757	0.40	-0.1
2,076,123	+		Pf6N2E2_1757	0.40	+1.4
2,076,124	-		Pf6N2E2_1757	0.40	+0.1
2,076,376	+		Pf6N2E2_1757	0.57	+1.4
2,076,377	-		Pf6N2E2_1757	0.57	-0.6
2,076,377	-		Pf6N2E2_1757	0.57	+0.2
2,076,377	-		Pf6N2E2_1757	0.57	-0.8
2,076,492	+		Pf6N2E2_1757	0.64	+1.4
2,076,493	-		Pf6N2E2_1757	0.64	-0.5
2,076,493	-		Pf6N2E2_1757	0.64	+0.2
2,076,495	-		Pf6N2E2_1757	0.65	+0.4
2,076,801	-		Pf6N2E2_1757	0.85	+0.2
2,077,037	+				+0.1
2,077,038	-				+1.4
2,077,376	-		Pf6N2E2_1758	0.58	-1.3
2,077,450	-		Pf6N2E2_1758	0.74	-1.1
2,077,558	+				-0.4
2,077,558	+				+0.8
2,077,572	+				-0.9
2,077,867	+		Pf6N2E2_1759	0.48	+1.4
2,077,868	-		Pf6N2E2_1759	0.48	-0.4
2,078,111	-		Pf6N2E2_1759	0.87	-0.1
2,078,261	+				-0.2
2,078,298	-				-0.5
2,078,298	-				+1.6
2,078,417	+		Pf6N2E2_1760	0.13	-0.6
2,078,459	+		Pf6N2E2_1760	0.17	-1.0
2,078,460	-		Pf6N2E2_1760	0.17	-0.2
2,078,537	+		Pf6N2E2_1760	0.24	+1.4
2,078,537	+		Pf6N2E2_1760	0.24	-0.9
2,078,538	-		Pf6N2E2_1760	0.25	+1.4