Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1739

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
2,050,533	-				+0.1
2,050,744	-		Pf6N2E2_1738	0.24	+0.4
2,051,258	+				+1.4
2,051,332	-				-0.8
2,051,336	+				+0.4
2,051,337	-				-0.1
2,051,337	-				-0.8
2,051,338	+				-0.2
2,051,417	-				-0.9
2,051,487	-				-0.7
2,051,525	+				+0.7
2,051,596	+		Pf6N2E2_1739	0.14	+0.4
2,051,623	+		Pf6N2E2_1739	0.16	-0.4
2,051,706	-		Pf6N2E2_1739	0.23	-0.2
2,051,706	-		Pf6N2E2_1739	0.23	+0.2
2,051,707	+		Pf6N2E2_1739	0.23	+1.4
2,051,707	+		Pf6N2E2_1739	0.23	-0.5
2,051,707	+		Pf6N2E2_1739	0.23	+0.5
2,051,707	+		Pf6N2E2_1739	0.23	-0.4
2,051,708	-		Pf6N2E2_1739	0.23	-0.5
2,051,734	+		Pf6N2E2_1739	0.25	-0.6
2,051,735	-		Pf6N2E2_1739	0.25	-1.2
2,052,161	-		Pf6N2E2_1739	0.58	-0.4
2,052,265	+		Pf6N2E2_1739	0.66	+0.2
2,052,266	-		Pf6N2E2_1739	0.66	+1.4
2,052,266	-		Pf6N2E2_1739	0.66	+0.4
2,052,584	-				-0.5
2,052,782	+				+0.4
2,052,782	+				+0.4
2,052,845	-		Pf6N2E2_1740	0.16	+1.7
2,052,845	-		Pf6N2E2_1740	0.16	+1.0
2,053,313	+		Pf6N2E2_1740	0.62	-0.2
2,053,313	+		Pf6N2E2_1740	0.62	+0.1
2,053,371	-		Pf6N2E2_1740	0.68	+0.2
2,053,629	-				+0.4
2,053,629	-				-0.7
2,053,665	-				+0.0