Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1597

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
1,867,500	+		Pf6N2E2_1594	0.54	+1.0
1,867,501	-		Pf6N2E2_1594	0.54	-0.3
1,867,545	+		Pf6N2E2_1594	0.60	-0.8
1,867,545	+		Pf6N2E2_1594	0.60	+0.2
1,867,545	+		Pf6N2E2_1594	0.60	-0.6
1,867,545	+		Pf6N2E2_1594	0.60	-0.9
1,867,545	+		Pf6N2E2_1594	0.60	-0.6
1,867,545	+		Pf6N2E2_1594	0.60	+0.2
1,867,546	-		Pf6N2E2_1594	0.60	+0.3
1,867,546	-		Pf6N2E2_1594	0.60	+1.4
1,867,546	-		Pf6N2E2_1594	0.60	+0.4
1,867,711	-		Pf6N2E2_1594	0.84	-0.4
1,867,779	+				-0.6
1,867,812	+				+0.1
1,867,821	+				+0.0
1,867,821	+				-0.4
1,867,821	+				-0.5
1,867,821	+				+1.4
1,867,821	+				+0.0
1,867,952	+				+0.2
1,867,953	-				-0.4
1,867,991	-				-0.0
1,868,162	-		Pf6N2E2_1595	0.85	+0.1
1,868,162	-		Pf6N2E2_1595	0.85	+1.4
1,868,211	-				-0.2
1,868,243	-				-1.1
1,868,243	-				+1.4
1,868,243	-				-0.6
1,868,259	+		Pf6N2E2_1596	0.13	+0.9
1,868,260	-		Pf6N2E2_1596	0.13	-0.9
1,868,761	+		Pf6N2E2_1597	0.11	-0.4
1,868,761	+		Pf6N2E2_1597	0.11	-0.2
1,868,761	+		Pf6N2E2_1597	0.11	-1.3
1,868,761	+		Pf6N2E2_1597	0.11	-0.6
1,868,762	-		Pf6N2E2_1597	0.11	-0.3
1,868,762	-		Pf6N2E2_1597	0.11	-0.1
1,869,116	+		Pf6N2E2_1597	0.25	+1.4
1,869,117	-		Pf6N2E2_1597	0.25	+1.4
1,869,204	-		Pf6N2E2_1597	0.29	-0.2
1,869,296	-		Pf6N2E2_1597	0.32	+0.5
1,869,296	-		Pf6N2E2_1597	0.32	-0.3
1,869,296	-		Pf6N2E2_1597	0.32	+0.5
1,869,296	-		Pf6N2E2_1597	0.32	+0.3
1,869,565	+		Pf6N2E2_1597	0.43	-0.2
1,869,653	-		Pf6N2E2_1597	0.47	+0.6
1,869,653	-		Pf6N2E2_1597	0.47	+0.6
1,869,653	-		Pf6N2E2_1597	0.47	-0.6
1,869,653	-		Pf6N2E2_1597	0.47	-0.9
1,869,736	-		Pf6N2E2_1597	0.50	-1.1
1,869,937	-		Pf6N2E2_1597	0.58	-0.6
1,870,021	+		Pf6N2E2_1597	0.61	-0.8
1,870,254	+		Pf6N2E2_1597	0.71	+1.6
1,870,328	-		Pf6N2E2_1597	0.74	+0.6
1,870,387	+		Pf6N2E2_1597	0.76	-0.2
1,870,388	-		Pf6N2E2_1597	0.76	-2.1
1,870,520	-		Pf6N2E2_1597	0.81	-1.1
1,870,549	+		Pf6N2E2_1597	0.83	-0.2
1,870,624	+		Pf6N2E2_1597	0.86	+0.3
1,870,729	+		Pf6N2E2_1597	0.90	-0.2
1,870,865	+				+0.2
1,870,866	-				+0.1
1,871,184	+		Pf6N2E2_1598	0.38	+0.2
1,871,319	+		Pf6N2E2_1598	0.66	-0.3
1,871,320	-		Pf6N2E2_1598	0.66	-0.9
1,871,368	-		Pf6N2E2_1598	0.76	+1.4
1,871,404	+		Pf6N2E2_1598	0.84	-0.0
1,871,404	+		Pf6N2E2_1598	0.84	+1.7
1,871,405	-		Pf6N2E2_1598	0.84	+0.4
1,871,405	-		Pf6N2E2_1598	0.84	-0.2
1,871,524	-				-1.0
1,871,553	+		Pf6N2E2_1599	0.10	+1.4
1,871,554	-		Pf6N2E2_1599	0.10	+1.4
1,871,554	-		Pf6N2E2_1599	0.10	-1.2
1,871,554	-		Pf6N2E2_1599	0.10	+1.4
1,871,554	-		Pf6N2E2_1599	0.10	-0.3
1,871,554	-		Pf6N2E2_1599	0.10	-0.0
1,871,554	-		Pf6N2E2_1599	0.10	+0.5
1,871,554	-		Pf6N2E2_1599	0.10	-0.6
1,871,557	-		Pf6N2E2_1599	0.11	-1.0
1,871,557	-		Pf6N2E2_1599	0.11	+0.8
1,871,715	+		Pf6N2E2_1599	0.37	+0.6
1,871,781	-		Pf6N2E2_1599	0.48	-0.4