Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1408

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
1,648,487	+		Pf6N2E2_1407	0.60	+1.1
1,648,488	-		Pf6N2E2_1407	0.60	-0.3
1,648,517	+		Pf6N2E2_1407	0.61	-0.2
1,648,517	+		Pf6N2E2_1407	0.61	+0.4
1,648,518	-		Pf6N2E2_1407	0.62	+0.4
1,648,635	+		Pf6N2E2_1407	0.68	+1.1
1,648,636	-		Pf6N2E2_1407	0.68	+0.2
1,648,636	-		Pf6N2E2_1407	0.68	-0.9
1,648,636	-		Pf6N2E2_1407	0.68	+0.4
1,648,685	+		Pf6N2E2_1407	0.70	+1.1
1,648,685	+		Pf6N2E2_1407	0.70	+1.2
1,648,685	+		Pf6N2E2_1407	0.70	-0.4
1,648,685	+		Pf6N2E2_1407	0.70	+2.4
1,648,694	+		Pf6N2E2_1407	0.71	-1.0
1,648,782	+		Pf6N2E2_1407	0.75	+1.1
1,648,823	+		Pf6N2E2_1407	0.77	-0.9
1,648,835	+		Pf6N2E2_1407	0.78	+0.1
1,648,835	+		Pf6N2E2_1407	0.78	+0.0
1,648,886	+		Pf6N2E2_1407	0.81	-0.5
1,648,887	-		Pf6N2E2_1407	0.81	+0.4
1,649,008	+		Pf6N2E2_1407	0.87	-2.0
1,649,043	-		Pf6N2E2_1407	0.89	+0.1
1,649,045	+		Pf6N2E2_1407	0.89	-0.2
1,649,045	+		Pf6N2E2_1407	0.89	+0.7
1,649,159	-				+0.1
1,649,445	-				+0.5
1,649,610	-		Pf6N2E2_1408	0.14	-0.1
1,649,792	+		Pf6N2E2_1408	0.23	+0.7
1,649,792	+		Pf6N2E2_1408	0.23	-1.2
1,649,793	-		Pf6N2E2_1408	0.23	+1.4
1,649,793	-		Pf6N2E2_1408	0.23	+0.8
1,649,793	-		Pf6N2E2_1408	0.23	-3.2
1,649,793	-		Pf6N2E2_1408	0.23	-0.1
1,649,793	-		Pf6N2E2_1408	0.23	-0.0
1,649,838	-		Pf6N2E2_1408	0.25	-0.3
1,650,321	-		Pf6N2E2_1408	0.47	-0.2
1,650,346	-		Pf6N2E2_1408	0.48	-1.4
1,650,569	+		Pf6N2E2_1408	0.59	+0.5
1,650,569	+		Pf6N2E2_1408	0.59	-0.6
1,650,570	-		Pf6N2E2_1408	0.59	-0.2
1,650,713	+		Pf6N2E2_1408	0.65	-0.2
1,650,714	-		Pf6N2E2_1408	0.65	+1.0
1,650,714	-		Pf6N2E2_1408	0.65	-0.2
1,650,869	+		Pf6N2E2_1408	0.73	-0.4
1,650,869	+		Pf6N2E2_1408	0.73	-1.5
1,651,157	+		Pf6N2E2_1408	0.86	+1.3
1,651,157	+		Pf6N2E2_1408	0.86	-0.8
1,651,158	-		Pf6N2E2_1408	0.86	-0.7
1,651,158	-		Pf6N2E2_1408	0.86	+0.6
1,651,260	-				-0.6
1,651,260	-				-0.2
1,651,260	-				-0.6
1,651,260	-				+0.8
1,651,260	-				-0.7
1,651,490	+				-1.6
1,651,569	-				+1.4
1,651,587	-				-0.0
1,652,224	+				+0.5
1,652,224	+				+1.4
1,652,375	+				+0.3
1,652,375	+				+0.7
1,652,376	-				-0.2
1,652,376	-				+0.4
1,652,376	-				+0.0
1,652,376	-				+0.0