Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1406

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
1,645,087	+				-0.9
1,645,121	+				-0.3
1,645,121	+				-1.1
1,645,121	+				-0.2
1,645,121	+				-1.0
1,645,121	+				-1.1
1,645,121	+				+0.5
1,645,121	+				+1.4
1,645,121	+				+1.4
1,645,122	-				-0.7
1,645,122	-				-0.3
1,645,122	-				+1.4
1,645,122	-				+0.8
1,645,122	-				-0.3
1,645,122	-				-0.5
1,645,122	-				-0.0
1,645,206	+		Pf6N2E2_1405	0.13	+0.4
1,645,207	-		Pf6N2E2_1405	0.13	-1.4
1,645,499	+		Pf6N2E2_1405	0.45	+0.7
1,645,499	+		Pf6N2E2_1405	0.45	-0.4
1,645,500	-		Pf6N2E2_1405	0.45	-0.1
1,645,616	+		Pf6N2E2_1405	0.58	-2.0
1,645,617	-		Pf6N2E2_1405	0.58	-0.7
1,645,617	-		Pf6N2E2_1405	0.58	+0.4
1,645,745	+		Pf6N2E2_1405	0.72	-0.1
1,645,745	+		Pf6N2E2_1405	0.72	+0.8
1,645,770	-				+1.4
1,645,965	-				+0.2
1,645,965	-				+0.7
1,646,165	-		Pf6N2E2_1406	0.13	-0.5
1,646,260	+		Pf6N2E2_1406	0.20	-0.6
1,646,261	-		Pf6N2E2_1406	0.20	-0.5
1,646,261	-		Pf6N2E2_1406	0.20	+0.4
1,646,308	+		Pf6N2E2_1406	0.24	-0.6
1,646,309	-		Pf6N2E2_1406	0.24	+0.2
1,646,309	-		Pf6N2E2_1406	0.24	-0.3
1,646,309	-		Pf6N2E2_1406	0.24	-1.2
1,646,441	-		Pf6N2E2_1406	0.34	-0.4
1,646,536	+		Pf6N2E2_1406	0.41	-0.1
1,646,536	+		Pf6N2E2_1406	0.41	+0.8
1,646,536	+		Pf6N2E2_1406	0.41	+0.1
1,646,537	-		Pf6N2E2_1406	0.41	+0.4
1,646,537	-		Pf6N2E2_1406	0.41	+0.1
1,646,545	+		Pf6N2E2_1406	0.42	-0.3
1,646,545	+		Pf6N2E2_1406	0.42	-0.3
1,646,545	+		Pf6N2E2_1406	0.42	-0.0
1,646,545	+		Pf6N2E2_1406	0.42	+0.6
1,646,545	+		Pf6N2E2_1406	0.42	+0.5
1,646,545	+		Pf6N2E2_1406	0.42	+0.3
1,646,640	-		Pf6N2E2_1406	0.49	+1.8
1,646,686	+		Pf6N2E2_1406	0.52	+0.2
1,646,686	+		Pf6N2E2_1406	0.52	-0.8
1,646,686	+		Pf6N2E2_1406	0.52	+0.5
1,646,686	+		Pf6N2E2_1406	0.52	-0.2
1,646,686	+		Pf6N2E2_1406	0.52	-1.8
1,646,686	+		Pf6N2E2_1406	0.52	-0.1
1,646,687	-		Pf6N2E2_1406	0.52	-0.4
1,646,687	-		Pf6N2E2_1406	0.52	+1.4
1,646,755	+		Pf6N2E2_1406	0.58	-0.2
1,646,755	+		Pf6N2E2_1406	0.58	-0.1
1,646,755	+		Pf6N2E2_1406	0.58	+0.1
1,646,756	-		Pf6N2E2_1406	0.58	-0.6
1,646,756	-		Pf6N2E2_1406	0.58	-2.5
1,646,809	-		Pf6N2E2_1406	0.62	+0.9
1,646,815	+		Pf6N2E2_1406	0.62	+1.4
1,647,030	-		Pf6N2E2_1406	0.79	-0.3
1,647,299	+				-0.3
1,647,299	+				+0.7
1,647,300	-				-0.3
1,647,300	-				+0.6
1,647,326	+				-0.1
1,647,404	+				-0.2
1,647,404	+				+0.1
1,647,404	+				+0.4
1,647,406	+				+0.1
1,647,408	-				-0.8
1,647,408	-				-0.6
1,647,590	+		Pf6N2E2_1407	0.13	-0.5
1,647,614	+		Pf6N2E2_1407	0.14	+0.4
1,647,614	+		Pf6N2E2_1407	0.14	+1.4
1,647,857	-		Pf6N2E2_1407	0.27	-0.2
1,647,995	+		Pf6N2E2_1407	0.34	-0.0
1,647,996	-		Pf6N2E2_1407	0.34	+1.4
1,648,079	+		Pf6N2E2_1407	0.39	-0.7
1,648,080	-		Pf6N2E2_1407	0.39	+1.2
1,648,248	-		Pf6N2E2_1407	0.47	+0.4
1,648,302	-		Pf6N2E2_1407	0.50	+1.4