Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1404

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
1,643,406	-		Pf6N2E2_1402	0.12	-0.1
1,643,406	-		Pf6N2E2_1402	0.12	+0.3
1,643,428	+		Pf6N2E2_1402	0.23	-0.6
1,643,428	+		Pf6N2E2_1402	0.23	+0.2
1,643,428	+		Pf6N2E2_1402	0.23	-0.5
1,643,428	+		Pf6N2E2_1402	0.23	-1.5
1,643,428	+		Pf6N2E2_1402	0.23	+1.2
1,643,429	-		Pf6N2E2_1402	0.24	+0.3
1,643,429	-		Pf6N2E2_1402	0.24	-0.9
1,643,429	-		Pf6N2E2_1402	0.24	-0.1
1,643,429	-		Pf6N2E2_1402	0.24	-0.3
1,643,429	-		Pf6N2E2_1402	0.24	-1.3
1,643,433	+		Pf6N2E2_1402	0.26	+0.4
1,643,433	+		Pf6N2E2_1402	0.26	-0.2
1,643,434	-		Pf6N2E2_1402	0.26	+0.8
1,643,434	-		Pf6N2E2_1402	0.26	-0.6
1,643,434	-		Pf6N2E2_1402	0.26	-0.5
1,643,434	-		Pf6N2E2_1402	0.26	-0.5
1,643,520	+		Pf6N2E2_1402	0.70	-1.7
1,643,521	-		Pf6N2E2_1402	0.70	+0.6
1,643,874	+		Pf6N2E2_1403	0.33	-0.1
1,643,946	+		Pf6N2E2_1403	0.47	+1.4
1,643,946	+		Pf6N2E2_1403	0.47	+1.4
1,643,947	-		Pf6N2E2_1403	0.47	-0.0
1,643,947	-		Pf6N2E2_1403	0.47	+0.2
1,643,947	-		Pf6N2E2_1403	0.47	+0.4
1,644,213	+				+0.8
1,644,213	+				-0.2
1,644,214	-				+0.2
1,644,214	-				-0.1
1,644,214	-				+0.2
1,644,314	+				+0.4
1,644,315	-				-0.6
1,644,603	+		Pf6N2E2_1404	0.42	-0.6
1,644,603	+		Pf6N2E2_1404	0.42	-0.1
1,644,604	-		Pf6N2E2_1404	0.42	-0.6
1,644,604	-		Pf6N2E2_1404	0.42	+0.4
1,644,810	+		Pf6N2E2_1404	0.67	+0.4
1,644,865	-		Pf6N2E2_1404	0.73	+0.9
1,645,087	+				-0.9
1,645,121	+				-0.3
1,645,121	+				-1.1
1,645,121	+				-0.2
1,645,121	+				-1.0
1,645,121	+				-1.1
1,645,121	+				+0.5
1,645,121	+				+1.4
1,645,121	+				+1.4
1,645,122	-				-0.7
1,645,122	-				-0.3
1,645,122	-				+1.4
1,645,122	-				+0.8
1,645,122	-				-0.3
1,645,122	-				-0.5
1,645,122	-				-0.0
1,645,206	+		Pf6N2E2_1405	0.13	+0.4
1,645,207	-		Pf6N2E2_1405	0.13	-1.4
1,645,499	+		Pf6N2E2_1405	0.45	+0.7
1,645,499	+		Pf6N2E2_1405	0.45	-0.4
1,645,500	-		Pf6N2E2_1405	0.45	-0.1
1,645,616	+		Pf6N2E2_1405	0.58	-2.0
1,645,617	-		Pf6N2E2_1405	0.58	-0.7
1,645,617	-		Pf6N2E2_1405	0.58	+0.4
1,645,745	+		Pf6N2E2_1405	0.72	-0.1
1,645,745	+		Pf6N2E2_1405	0.72	+0.8
1,645,770	-				+1.4
1,645,965	-				+0.2
1,645,965	-				+0.7