Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1295

Experiment: Nitrate reduction, replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate A
1,528,993	+		Pf6N2E2_1294	0.69	-1.4
1,529,475	+				-1.4
1,529,496	+				-2.6
1,529,678	-				-1.1
1,529,678	-				-0.1
1,529,678	-				-1.7
1,529,730	+				-2.7
1,529,731	-				-1.0
1,529,731	-				+0.9
1,529,731	-				+1.8
1,529,742	+				-1.6
1,529,743	-				+0.9
1,529,743	-				-0.8
1,529,745	+				+0.4
1,529,746	-				-0.9
1,529,748	+				-1.6
1,529,748	+				-1.4
1,529,748	+				-1.3
1,529,748	+				-2.5
1,529,748	+				-3.4
1,529,749	-				-0.6
1,529,752	+				-2.9
1,529,752	+				-0.9
1,529,752	+				-1.9
1,529,752	+				-2.2
1,529,753	-				+0.9
1,529,753	-				+0.4
1,529,753	-				-0.1
1,529,753	-				+0.9
1,529,753	-				+0.6
1,529,803	+				-1.1
1,529,815	+				+0.3
1,529,816	-				+0.4
1,529,876	+				-0.5
1,529,876	+				+0.8
1,529,900	+				-0.9
1,529,901	-				+1.9
1,529,901	-				+0.9
1,529,901	-				-0.1
1,529,942	+				+1.4
1,529,942	+				+0.2
1,529,942	+				+0.9
1,529,942	+				-0.9
1,529,942	+				+1.4
1,529,943	-				-0.1
1,529,943	-				+1.4
1,529,943	-				+0.4
1,529,943	-				+1.6
1,529,943	-				-0.3
1,530,112	+		Pf6N2E2_1295	0.12	-1.6
1,530,112	+		Pf6N2E2_1295	0.12	-1.4
1,530,113	-		Pf6N2E2_1295	0.12	+1.4
1,530,222	-				-0.6
1,530,242	-		Pf6N2E2_1295	0.22	+1.4
1,530,299	-		Pf6N2E2_1295	0.26	-2.0
1,530,309	+		Pf6N2E2_1295	0.27	-1.5
1,530,385	+		Pf6N2E2_1295	0.32	-1.6
1,530,433	+		Pf6N2E2_1295	0.36	-1.4
1,530,434	-		Pf6N2E2_1295	0.36	-3.7
1,530,434	-		Pf6N2E2_1295	0.36	-3.4
1,530,593	+		Pf6N2E2_1295	0.47	-0.6
1,530,593	+		Pf6N2E2_1295	0.47	+0.0
1,530,670	-		Pf6N2E2_1295	0.53	-1.6
1,531,164	-		Pf6N2E2_1295	0.89	-0.6
1,531,605	-		Pf6N2E2_1296	0.42	-1.8
1,531,605	-		Pf6N2E2_1296	0.42	-3.1
1,531,613	+		Pf6N2E2_1296	0.43	+1.4
1,531,619	+		Pf6N2E2_1296	0.44	-2.6
1,531,620	-		Pf6N2E2_1296	0.44	-3.7
1,531,659	+		Pf6N2E2_1296	0.50	+0.4
1,531,660	-		Pf6N2E2_1296	0.51	-1.2
1,531,727	+		Pf6N2E2_1296	0.61	-2.9
1,531,727	+		Pf6N2E2_1296	0.61	-3.4
1,531,727	+		Pf6N2E2_1296	0.61	-2.3
1,531,727	+		Pf6N2E2_1296	0.61	-2.2
1,531,728	-		Pf6N2E2_1296	0.61	-1.3
1,531,941	-				-2.3
1,532,025	+				-0.2
1,532,096	+				-0.1