Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_622

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C
707,996	-		Pf6N2E2_621	0.42	-1.1
708,275	+		Pf6N2E2_621	0.58	-0.3
708,567	+		Pf6N2E2_621	0.75	+1.5
708,634	+		Pf6N2E2_621	0.79	+0.2
708,634	+		Pf6N2E2_621	0.79	+0.9
708,635	-		Pf6N2E2_621	0.79	-0.2
708,861	+				-0.5
708,862	-				+1.5
708,862	-				-0.1
708,950	-				-0.3
708,950	-				+1.5
708,958	+				+0.5
708,959	-				+0.5
709,165	+		Pf6N2E2_622	0.16	-0.2
709,166	-		Pf6N2E2_622	0.16	-0.8
709,245	+		Pf6N2E2_622	0.23	-0.0
709,639	+		Pf6N2E2_622	0.60	-0.5
709,639	+		Pf6N2E2_622	0.60	+0.6
709,640	-		Pf6N2E2_622	0.60	-1.7
710,168	-		Pf6N2E2_623	0.20	+1.2
710,628	-				+1.2
711,067	+		Pf6N2E2_624	0.54	-1.5