Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2898

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C
3,385,913	-				-0.1
3,385,913	-				-0.5
3,385,913	-				-0.2
3,385,922	-				+0.7
3,386,022	-				-0.7
3,386,114	+		Pf6N2E2_2897	0.19	-0.7
3,386,114	+		Pf6N2E2_2897	0.19	-0.0
3,386,114	+		Pf6N2E2_2897	0.19	-0.3
3,386,114	+		Pf6N2E2_2897	0.19	-0.4
3,386,114	+		Pf6N2E2_2897	0.19	-0.6
3,386,114	+		Pf6N2E2_2897	0.19	-0.4
3,386,115	-		Pf6N2E2_2897	0.19	-1.2
3,386,115	-		Pf6N2E2_2897	0.19	+0.3
3,386,115	-		Pf6N2E2_2897	0.19	+0.2
3,386,115	-		Pf6N2E2_2897	0.19	-0.2
3,386,354	+		Pf6N2E2_2897	0.44	+0.0
3,386,354	+		Pf6N2E2_2897	0.44	-0.2
3,386,354	+		Pf6N2E2_2897	0.44	-0.2
3,386,354	+		Pf6N2E2_2897	0.44	+0.6
3,386,354	+		Pf6N2E2_2897	0.44	+0.7
3,386,354	+		Pf6N2E2_2897	0.44	+3.0
3,386,355	-		Pf6N2E2_2897	0.44	+0.5
3,386,355	-		Pf6N2E2_2897	0.44	+0.5
3,386,463	+		Pf6N2E2_2897	0.56	+1.4
3,386,463	+		Pf6N2E2_2897	0.56	+0.7
3,386,464	-		Pf6N2E2_2897	0.56	-1.2
3,386,464	-		Pf6N2E2_2897	0.56	-1.5
3,386,464	-		Pf6N2E2_2897	0.56	+1.4
3,386,464	-		Pf6N2E2_2897	0.56	+0.2
3,386,464	-		Pf6N2E2_2897	0.56	-0.8
3,386,533	+		Pf6N2E2_2897	0.63	-0.9
3,386,533	+		Pf6N2E2_2897	0.63	-1.3
3,386,667	+		Pf6N2E2_2897	0.77	-0.2
3,386,756	+		Pf6N2E2_2897	0.86	+0.0
3,386,757	-		Pf6N2E2_2897	0.86	+0.1
3,386,786	+		Pf6N2E2_2897	0.89	+1.4
3,386,787	-		Pf6N2E2_2897	0.89	-0.4
3,386,892	-				-0.9
3,386,892	-				+1.0
3,386,892	-				+0.3
3,386,892	-				-0.5
3,388,755	-				+0.4
3,388,755	-				-0.1
3,388,755	-				+0.3
3,388,889	+				+0.1
3,388,994	+				+3.0
3,388,994	+				+1.2
3,388,995	-				+0.7
3,388,995	-				+0.6
3,388,995	-				+0.6
3,388,995	-				+1.4
3,388,995	-				+1.4
3,389,266	+		Pf6N2E2_2899	0.33	-0.5
3,389,267	-		Pf6N2E2_2899	0.34	+1.4
3,389,267	-		Pf6N2E2_2899	0.34	+0.9
3,389,333	+		Pf6N2E2_2899	0.40	+0.7
3,389,477	+		Pf6N2E2_2899	0.54	+0.2
3,389,478	-		Pf6N2E2_2899	0.55	+0.9
3,389,478	-		Pf6N2E2_2899	0.55	-0.2
3,389,478	-		Pf6N2E2_2899	0.55	+0.4
3,389,478	-		Pf6N2E2_2899	0.55	-0.6
3,389,507	+		Pf6N2E2_2899	0.57	+0.0
3,389,508	-		Pf6N2E2_2899	0.58	-0.9