Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2573

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate C
3,030,377	+		Pf6N2E2_2571	0.67	-1.1
3,030,378	-		Pf6N2E2_2571	0.67	-0.0
3,030,378	-		Pf6N2E2_2571	0.67	-0.6
3,030,378	-		Pf6N2E2_2571	0.67	-0.5
3,030,378	-		Pf6N2E2_2571	0.67	+0.1
3,030,378	-		Pf6N2E2_2571	0.67	-0.8
3,030,378	-		Pf6N2E2_2571	0.67	+0.2
3,030,645	+				+0.3
3,030,645	+				+0.1
3,030,645	+				-0.7
3,030,645	+				-0.3
3,030,646	-				-1.4
3,030,646	-				+1.4
3,030,734	+		Pf6N2E2_2572	0.18	+1.4
3,030,735	-		Pf6N2E2_2572	0.18	-1.9
3,030,743	-		Pf6N2E2_2572	0.21	-1.0
3,030,988	+		Pf6N2E2_2572	0.84	-1.6
3,031,067	+				-0.3
3,031,067	+				-0.9
3,031,068	-				-0.1
3,031,154	+				-1.3
3,031,155	-				-2.1
3,031,155	-				-0.9
3,031,261	-				+0.5
3,031,261	-				+0.4
3,031,334	-		Pf6N2E2_2573	0.18	+1.3
3,031,334	-		Pf6N2E2_2573	0.18	+0.9
3,031,334	-		Pf6N2E2_2573	0.18	+1.7
3,031,520	+		Pf6N2E2_2573	0.43	+1.8
3,031,520	+		Pf6N2E2_2573	0.43	+0.6
3,031,521	-		Pf6N2E2_2573	0.43	+0.8
3,031,540	+		Pf6N2E2_2573	0.45	+0.4
3,031,586	+		Pf6N2E2_2573	0.51	-0.2
3,031,604	+		Pf6N2E2_2573	0.54	+1.7
3,031,644	-		Pf6N2E2_2573	0.59	+0.8
3,031,723	+		Pf6N2E2_2573	0.70	+2.4
3,031,723	+		Pf6N2E2_2573	0.70	+1.4
3,031,724	-		Pf6N2E2_2573	0.70	+1.3
3,031,724	-		Pf6N2E2_2573	0.70	+0.2
3,031,724	-		Pf6N2E2_2573	0.70	+1.3
3,031,757	-		Pf6N2E2_2573	0.74	+0.4
3,031,846	+		Pf6N2E2_2573	0.86	+1.2
3,031,846	+		Pf6N2E2_2573	0.86	+1.3
3,031,847	-		Pf6N2E2_2573	0.87	+1.6
3,031,892	-				+1.5
3,031,919	-				+0.9
3,031,919	-				+0.4
3,031,931	-				+1.4
3,031,931	-				+1.8
3,031,947	-				+2.4
3,032,154	+		Pf6N2E2_2574	0.25	-0.9
3,032,154	+		Pf6N2E2_2574	0.25	-0.2
3,032,271	+		Pf6N2E2_2574	0.39	-0.9
3,032,795	-				+0.7
3,032,795	-				+1.2
3,032,798	+				+1.4
3,032,799	-				+0.9
3,032,833	+				+0.8
3,032,834	-				+1.4
3,032,834	-				+0.6
3,032,834	-				-0.3
3,032,863	+				-2.1
3,032,863	+				+0.8
3,032,864	-				-1.0
3,032,864	-				+0.5
3,032,864	-				-1.1
3,032,864	-				+0.7
3,032,864	-				-0.4
3,032,864	-				-0.4
3,032,864	-				+1.1
3,032,864	-				-0.3
3,032,868	-				+0.4
3,032,887	-				-0.1
3,032,887	-				+1.4
3,032,887	-				+1.1
3,032,887	-				+1.4
3,032,918	+				-0.6
3,032,919	-				+1.2
3,032,919	-				+1.0
3,032,919	-				+0.8
3,032,919	-				+1.0
3,032,923	-				+0.7
3,032,923	-				+1.1
3,032,923	-				+0.5
3,032,935	-				+1.1
3,032,935	-				+1.6
3,032,935	-				+0.8
3,032,935	-				+0.7