Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2116

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C
2,512,848	+		Pf6N2E2_2115	0.35	+1.4
2,512,848	+		Pf6N2E2_2115	0.35	+2.4
2,512,848	+		Pf6N2E2_2115	0.35	+1.2
2,512,849	-		Pf6N2E2_2115	0.35	-0.5
2,512,849	-		Pf6N2E2_2115	0.35	-0.3
2,512,849	-		Pf6N2E2_2115	0.35	-0.4
2,512,849	-		Pf6N2E2_2115	0.35	+0.6
2,512,852	-		Pf6N2E2_2115	0.35	+0.2
2,512,852	-		Pf6N2E2_2115	0.35	+0.8
2,512,852	-		Pf6N2E2_2115	0.35	+0.2
2,512,852	-		Pf6N2E2_2115	0.35	-0.6
2,512,852	-		Pf6N2E2_2115	0.35	-0.6
2,512,852	-		Pf6N2E2_2115	0.35	-0.7
2,513,001	+		Pf6N2E2_2115	0.45	+0.4
2,513,002	-		Pf6N2E2_2115	0.45	-0.2
2,513,002	-		Pf6N2E2_2115	0.45	-0.1
2,513,002	-		Pf6N2E2_2115	0.45	-0.4
2,513,220	+		Pf6N2E2_2115	0.60	-0.1
2,513,220	+		Pf6N2E2_2115	0.60	+0.4
2,513,221	-		Pf6N2E2_2115	0.61	-0.7
2,513,221	-		Pf6N2E2_2115	0.61	+0.7
2,513,221	-		Pf6N2E2_2115	0.61	+1.0
2,513,245	-		Pf6N2E2_2115	0.62	+0.3
2,513,355	+		Pf6N2E2_2115	0.70	-0.8
2,513,355	+		Pf6N2E2_2115	0.70	-0.8
2,513,355	+		Pf6N2E2_2115	0.70	-0.6
2,513,355	+		Pf6N2E2_2115	0.70	-0.2
2,513,355	+		Pf6N2E2_2115	0.70	+1.4
2,513,356	-		Pf6N2E2_2115	0.70	+2.4
2,513,356	-		Pf6N2E2_2115	0.70	-0.1
2,513,356	-		Pf6N2E2_2115	0.70	+0.1
2,513,356	-		Pf6N2E2_2115	0.70	+1.4
2,513,356	-		Pf6N2E2_2115	0.70	-1.8
2,513,356	-		Pf6N2E2_2115	0.70	+0.0
2,513,356	-		Pf6N2E2_2115	0.70	+0.1
2,513,673	+				+1.4
2,513,673	+				-0.2
2,513,674	-				-0.1
2,513,674	-				-1.2
2,513,729	+				+0.3
2,513,730	-				-0.9
2,513,931	+				+0.2
2,514,052	+		Pf6N2E2_2116	0.18	+1.2
2,514,053	-		Pf6N2E2_2116	0.18	-0.1
2,514,069	+		Pf6N2E2_2116	0.19	+0.5
2,514,070	-		Pf6N2E2_2116	0.19	+0.1
2,514,263	-		Pf6N2E2_2116	0.34	+0.6
2,514,271	+		Pf6N2E2_2116	0.34	+0.2
2,514,271	+		Pf6N2E2_2116	0.34	-1.0
2,514,578	+		Pf6N2E2_2116	0.57	+0.4
2,514,578	+		Pf6N2E2_2116	0.57	+0.6
2,514,579	-		Pf6N2E2_2116	0.57	-0.3
2,514,587	-		Pf6N2E2_2116	0.58	+0.5
2,515,051	+				+0.5
2,515,051	+				-1.0
2,515,051	+				+0.2
2,515,052	-				-1.8
2,515,052	-				-1.4
2,515,052	-				+0.1
2,515,052	-				+0.3
2,515,052	-				-0.4
2,515,052	-				+1.6
2,515,052	-				+0.4
2,515,068	-				-0.8
2,515,208	-				+0.4
2,515,208	-				-0.3
2,515,343	+				+0.1
2,515,350	+				-0.4
2,515,461	+				-1.8
2,515,462	-				+0.3
2,515,462	-				+1.4
2,515,462	-				-1.9
2,515,476	+				+0.1
2,515,476	+				+1.4
2,515,477	-				+0.8
2,515,608	-		Pf6N2E2_2117	0.12	-1.4
2,515,617	+		Pf6N2E2_2117	0.12	-1.9
2,515,618	-		Pf6N2E2_2117	0.12	+0.1
2,515,768	-		Pf6N2E2_2117	0.19	-2.3
2,515,869	+		Pf6N2E2_2117	0.23	-0.6
2,515,989	+		Pf6N2E2_2117	0.29	-0.9
2,515,989	+		Pf6N2E2_2117	0.29	-2.7
2,515,989	+		Pf6N2E2_2117	0.29	-1.6
2,515,989	+		Pf6N2E2_2117	0.29	-1.0
2,515,989	+		Pf6N2E2_2117	0.29	-0.3
2,515,989	+		Pf6N2E2_2117	0.29	-1.1
2,515,989	+		Pf6N2E2_2117	0.29	-1.4
2,515,989	+		Pf6N2E2_2117	0.29	-0.6
2,515,990	-		Pf6N2E2_2117	0.29	-0.9
2,515,990	-		Pf6N2E2_2117	0.29	-3.1
2,515,990	-		Pf6N2E2_2117	0.29	-0.5
2,515,990	-		Pf6N2E2_2117	0.29	-0.2
2,515,990	-		Pf6N2E2_2117	0.29	+0.5
2,515,990	-		Pf6N2E2_2117	0.29	-0.6
2,515,990	-		Pf6N2E2_2117	0.29	-1.9
2,515,990	-		Pf6N2E2_2117	0.29	-1.5
2,515,990	-		Pf6N2E2_2117	0.29	-0.0
2,516,052	+		Pf6N2E2_2117	0.31	-0.9
2,516,052	+		Pf6N2E2_2117	0.31	-1.6
2,516,053	-		Pf6N2E2_2117	0.31	-2.9
2,516,053	-		Pf6N2E2_2117	0.31	+1.4
2,516,053	-		Pf6N2E2_2117	0.31	-0.6
2,516,091	+		Pf6N2E2_2117	0.33	-1.5
2,516,092	-		Pf6N2E2_2117	0.33	+1.4
2,516,092	-		Pf6N2E2_2117	0.33	-0.7
2,516,092	-		Pf6N2E2_2117	0.33	-1.4