Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1412

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N1-B4; replicate C
1,656,988	+		Pf6N2E2_1411	0.31	-2.9
1,656,989	-		Pf6N2E2_1411	0.31	+1.4
1,657,014	+		Pf6N2E2_1411	0.33	-2.0
1,657,014	+		Pf6N2E2_1411	0.33	-0.6
1,657,014	+		Pf6N2E2_1411	0.33	+1.4
1,657,015	-				+1.4
1,657,015	-		Pf6N2E2_1411	0.34	-1.4
1,657,015	-		Pf6N2E2_1411	0.34	-1.0
1,657,015	-		Pf6N2E2_1411	0.34	-2.6
1,657,019	-		Pf6N2E2_1411	0.34	-4.1
1,657,019	-		Pf6N2E2_1411	0.34	-2.1
1,657,019	-		Pf6N2E2_1411	0.34	-2.2
1,657,037	+		Pf6N2E2_1411	0.36	-3.7
1,657,086	-		Pf6N2E2_1411	0.40	+1.4
1,657,174	+		Pf6N2E2_1411	0.48	-3.2
1,657,175	-		Pf6N2E2_1411	0.48	-1.6
1,657,175	-		Pf6N2E2_1411	0.48	+1.4
1,657,175	-		Pf6N2E2_1411	0.48	-2.6
1,657,175	-		Pf6N2E2_1411	0.48	-0.9
1,657,175	-		Pf6N2E2_1411	0.48	-0.6
1,657,175	-		Pf6N2E2_1411	0.48	-1.4
1,657,175	-		Pf6N2E2_1411	0.48	-1.2
1,657,300	+		Pf6N2E2_1411	0.60	-3.2
1,657,301	-		Pf6N2E2_1411	0.60	-1.6
1,657,615	+		Pf6N2E2_1411	0.88	+1.4
1,657,616	-		Pf6N2E2_1411	0.88	-1.7
1,657,616	-		Pf6N2E2_1411	0.88	-2.8
1,657,753	+				-3.0
1,657,754	-				-1.1
1,657,754	-				-2.0
1,657,935	-		Pf6N2E2_1412	0.62	-3.4
1,657,935	-		Pf6N2E2_1412	0.62	-0.2
1,657,935	-		Pf6N2E2_1412	0.62	-2.5
1,657,935	-		Pf6N2E2_1412	0.62	-0.8
1,657,941	-		Pf6N2E2_1412	0.63	-1.9
1,658,130	+				-0.4
1,658,130	+				-1.3
1,658,130	+				-0.7
1,658,131	-				+0.2
1,658,131	-				-0.1
1,658,131	-				+1.1
1,658,131	-				+0.9
1,658,683	-				+0.4
1,658,817	+		Pf6N2E2_1414	0.54	+0.9
1,658,995	+				+1.4
1,658,995	+				+0.1
1,658,995	+				+0.1
1,658,995	+				+0.4
1,658,995	+				+0.4
1,658,995	+				+0.4
1,658,995	+				+1.4
1,658,996	-				-0.6
1,658,996	-				-1.6
1,658,996	-				+0.5
1,658,996	-				+1.4
1,658,996	-				-0.6
1,659,014	-				+0.4
1,659,014	-				+0.3