Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5999

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B
6,814,553	+		Pf6N2E2_5998	0.53	-1.1
6,814,553	+		Pf6N2E2_5998	0.53	-0.5
6,814,553	+		Pf6N2E2_5998	0.53	+0.0
6,814,732	+		Pf6N2E2_5998	0.75	+0.0
6,814,733	-		Pf6N2E2_5998	0.75	-0.1
6,814,733	-		Pf6N2E2_5998	0.75	-0.3
6,814,775	+		Pf6N2E2_5998	0.80	-0.2
6,814,775	+		Pf6N2E2_5998	0.80	+0.5
6,814,776	-		Pf6N2E2_5998	0.80	+0.6
6,814,792	+		Pf6N2E2_5998	0.82	+0.4
6,814,792	+		Pf6N2E2_5998	0.82	-0.1
6,814,792	+		Pf6N2E2_5998	0.82	+0.3
6,814,792	+		Pf6N2E2_5998	0.82	+0.6
6,814,792	+		Pf6N2E2_5998	0.82	-0.4
6,814,792	+		Pf6N2E2_5998	0.82	+0.1
6,814,793	-		Pf6N2E2_5998	0.82	+0.2
6,814,793	-		Pf6N2E2_5998	0.82	+0.3
6,814,886	+				+0.4
6,814,923	+				+0.3
6,814,923	+				-0.1
6,814,923	+				+0.2
6,814,923	+				-0.3
6,814,923	+				-0.1
6,814,923	+				-0.8
6,814,923	+				-0.7
6,814,923	+				-0.3
6,814,924	-				+0.4
6,814,924	-				+0.2
6,814,924	-				+0.2
6,815,026	+				-0.8
6,815,026	+				-0.7
6,815,026	+				+1.0
6,815,026	+				-1.4
6,815,026	+				-1.1
6,815,026	+				+0.4
6,815,027	-				-0.9
6,815,027	-				+0.2
6,815,027	-				+0.3
6,815,027	-				+0.9
6,815,027	-				-0.1
6,815,027	-				-0.9
6,815,027	-				+0.5
6,815,078	+				-0.5
6,815,079	-				-0.5
6,815,168	+				-0.2
6,815,169	-				+1.0
6,815,169	-				+0.9
6,815,174	+				+0.3
6,815,174	+				+0.3
6,815,174	+				+0.5
6,815,174	+				+0.4
6,815,175	-				+0.5
6,815,175	-				-2.9
6,815,181	+				-0.3
6,815,265	+				-0.5
6,815,266	-				+1.5
6,815,266	-				-2.1
6,815,266	-				-0.2
6,815,266	-				+0.7
6,815,266	-				-0.8
6,815,266	-				-1.6
6,815,274	+				-0.1
6,815,275	-				-1.2
6,815,275	-				+0.7
6,815,279	+				+1.5
6,815,315	+				+0.4
6,815,315	+				+0.5
6,815,316	-				-0.6
6,815,316	-				+0.1
6,815,386	-				-1.1
6,815,386	-				+2.5
6,815,497	+				+0.2
6,815,497	+				+1.5
6,815,498	-				+0.2
6,815,498	-				+0.2
6,815,518	-				+2.5
6,815,568	+				-0.1
6,815,568	+				+0.1
6,815,569	-				-1.6
6,815,569	-				-0.1
6,816,100	+		Pf6N2E2_5999	0.49	+0.4
6,816,258	-		Pf6N2E2_5999	0.62	+0.2
6,816,258	-		Pf6N2E2_5999	0.62	-0.8
6,816,258	-		Pf6N2E2_5999	0.62	-1.1
6,816,258	-		Pf6N2E2_5999	0.62	-0.5
6,816,259	+		Pf6N2E2_5999	0.62	-0.6
6,816,260	-		Pf6N2E2_5999	0.62	+1.4
6,816,643	+				+0.1
6,816,868	+				+0.7
6,816,869	-				+0.4
6,816,869	-				-1.7
6,816,869	-				-0.4
6,817,056	+		Pf6N2E2_6000	0.13	+1.5
6,817,347	+		Pf6N2E2_6000	0.27	-0.7
6,817,601	-		Pf6N2E2_6000	0.39	-1.2
6,817,711	+		Pf6N2E2_6000	0.44	-0.2
6,817,712	-		Pf6N2E2_6000	0.44	-0.2
6,817,712	-		Pf6N2E2_6000	0.44	-0.3