Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5698

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B
6,510,166	+		Pf6N2E2_5697	0.64	+0.8
6,510,166	+		Pf6N2E2_5697	0.64	-0.2
6,510,166	+		Pf6N2E2_5697	0.64	+1.4
6,510,166	+		Pf6N2E2_5697	0.64	-0.3
6,510,167	-		Pf6N2E2_5697	0.64	+0.5
6,510,167	-		Pf6N2E2_5697	0.64	+1.3
6,510,172	+		Pf6N2E2_5697	0.65	+0.9
6,510,172	+		Pf6N2E2_5697	0.65	+1.1
6,510,172	+		Pf6N2E2_5697	0.65	+1.0
6,510,172	+		Pf6N2E2_5697	0.65	+1.1
6,510,173	-		Pf6N2E2_5697	0.65	+1.0
6,510,185	-		Pf6N2E2_5697	0.66	+1.3
6,510,205	+		Pf6N2E2_5697	0.67	+1.5
6,510,205	+		Pf6N2E2_5697	0.67	+1.1
6,510,205	+		Pf6N2E2_5697	0.67	+0.6
6,510,206	-		Pf6N2E2_5697	0.67	+0.9
6,510,208	+		Pf6N2E2_5697	0.67	+0.5
6,510,209	-		Pf6N2E2_5697	0.67	+1.3
6,510,209	-		Pf6N2E2_5697	0.67	+1.0
6,510,209	-		Pf6N2E2_5697	0.67	+1.1
6,510,209	-		Pf6N2E2_5697	0.67	-0.1
6,510,209	-		Pf6N2E2_5697	0.67	+1.8
6,510,296	-		Pf6N2E2_5697	0.74	+1.1
6,510,296	-		Pf6N2E2_5697	0.74	+1.0
6,510,296	-		Pf6N2E2_5697	0.74	+1.1
6,510,296	-		Pf6N2E2_5697	0.74	+0.6
6,510,296	-		Pf6N2E2_5697	0.74	+1.3
6,510,324	+		Pf6N2E2_5697	0.76	+0.5
6,510,324	+		Pf6N2E2_5697	0.76	+1.2
6,510,324	+		Pf6N2E2_5697	0.76	+1.1
6,510,324	+		Pf6N2E2_5697	0.76	+1.1
6,510,324	+		Pf6N2E2_5697	0.76	+1.1
6,510,324	+		Pf6N2E2_5697	0.76	+0.6
6,510,324	+		Pf6N2E2_5697	0.76	+0.7
6,510,325	-		Pf6N2E2_5697	0.76	-0.6
6,510,325	-		Pf6N2E2_5697	0.76	+0.7
6,510,325	-		Pf6N2E2_5697	0.76	+1.5
6,510,325	-		Pf6N2E2_5697	0.76	+1.2
6,510,325	-		Pf6N2E2_5697	0.76	+1.0
6,510,325	-		Pf6N2E2_5697	0.76	+0.4
6,510,325	-		Pf6N2E2_5697	0.76	+1.0
6,510,325	-		Pf6N2E2_5697	0.76	+1.1
6,510,325	-		Pf6N2E2_5697	0.76	+0.0
6,510,325	-		Pf6N2E2_5697	0.76	-0.2
6,510,572	+				+0.6
6,510,572	+				+1.2
6,510,572	+				+0.9
6,510,572	+				+0.5
6,510,573	-				+1.3
6,510,573	-				+2.2
6,510,573	-				+0.4
6,510,573	-				+2.3
6,510,704	-				-1.0
6,510,749	-				-0.6
6,510,791	+				-1.6
6,510,791	+				-0.7
6,510,792	-				-0.1
6,510,792	-				-0.0
6,510,886	+				-1.8
6,510,886	+				-0.4
6,510,983	-				-0.4
6,510,983	-				-1.6
6,513,963	-				-0.5
6,513,963	-				-1.3
6,514,252	-				-0.1
6,514,252	-				+1.1
6,514,252	-				-1.3
6,514,258	-				-0.6
6,514,258	-				+0.3
6,514,317	-				-1.4
6,514,317	-				+0.6
6,514,317	-				+0.6
6,514,317	-				-0.1
6,514,317	-				-0.1
6,514,326	+				-1.1
6,514,382	-				-0.1
6,514,382	-				-0.5
6,514,382	-				-0.7
6,514,463	+				-0.1
6,514,463	+				-0.3
6,514,463	+				+0.4
6,514,464	-				-1.2
6,514,464	-				-0.7
6,514,464	-				+1.5
6,514,520	-				+1.5
6,514,521	+				-1.0
6,514,521	+				+1.5
6,514,521	+				-0.1
6,514,521	+				+0.2
6,514,521	+				-0.8
6,514,521	-				+2.5
6,514,522	-				-0.2
6,514,522	-				-0.1
6,514,522	-				+0.1
6,514,522	-				+0.5
6,514,522	-				-0.3
6,514,522	-				+1.5
6,514,522	-				-0.7
6,514,561	+				-0.6
6,514,562	-				+1.5
6,514,562	-				-0.8
6,514,562	-				+0.5
6,514,582	+				-0.6
6,514,744	-				-0.1
6,514,744	-				-0.2
6,514,744	-				-0.7
6,514,791	+				-0.4
6,514,792	-				+0.5
6,514,838	+				-0.0
6,514,838	+				+0.1