Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3255

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate B
3,766,076	-		Pf6N2E2_3255	0.38	+1.5
3,766,076	-		Pf6N2E2_3255	0.38	-2.2
3,766,076	-		Pf6N2E2_3255	0.38	+1.5
3,766,076	-		Pf6N2E2_3255	0.38	-0.9
3,766,076	-		Pf6N2E2_3255	0.38	-1.5
3,766,076	-		Pf6N2E2_3255	0.38	-1.8
3,766,195	-		Pf6N2E2_3255	0.88	-3.3
3,766,195	-		Pf6N2E2_3255	0.88	-1.9
3,766,195	-		Pf6N2E2_3255	0.88	-3.0
3,766,213	-				-0.8
3,766,317	+				-0.0
3,766,489	+		Pf6N2E2_3256	0.13	+1.5
3,766,966	+		Pf6N2E2_3257	0.31	-1.1
3,766,978	+		Pf6N2E2_3257	0.33	-1.5
3,766,979	-		Pf6N2E2_3257	0.33	-0.1
3,767,074	+		Pf6N2E2_3257	0.48	+1.5
3,767,074	+		Pf6N2E2_3257	0.48	-0.3
3,767,075	-		Pf6N2E2_3257	0.48	+0.5
3,767,167	+		Pf6N2E2_3257	0.62	+1.5
3,767,167	+		Pf6N2E2_3257	0.62	+1.9
3,767,167	+		Pf6N2E2_3257	0.62	+0.2
3,767,168	-		Pf6N2E2_3257	0.62	+1.5