Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_897

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
1,049,161	+				+1.5
1,049,161	+				+0.5
1,049,162	-				+0.1
1,049,227	-				-1.1
1,049,358	+		Pf6N2E2_896	0.22	+1.5
1,049,467	+		Pf6N2E2_896	0.33	-1.2
1,049,689	+		Pf6N2E2_896	0.58	-0.1
1,049,690	-		Pf6N2E2_896	0.58	-0.8
1,049,744	+		Pf6N2E2_896	0.64	-1.3
1,049,744	+		Pf6N2E2_896	0.64	-0.4
1,049,786	-		Pf6N2E2_896	0.68	+0.0
1,049,848	-		Pf6N2E2_896	0.75	+0.8
1,050,052	-				+0.6
1,050,077	+				-0.4
1,050,077	+				+0.1
1,050,077	+				-0.1
1,050,077	+				-0.6
1,050,077	+				+0.8
1,050,077	+				-0.3
1,050,077	+				+2.5
1,050,077	+				-0.2
1,050,077	+				+0.1
1,050,078	-				+0.1
1,050,078	-				+1.1
1,050,078	-				-0.1
1,050,078	-				+0.9
1,050,078	-				-0.5
1,050,078	-				+0.3
1,050,078	-				-0.5
1,050,078	-				+0.5
1,050,078	-				-0.8
1,050,078	-				-1.1
1,050,080	+				+0.4
1,050,080	+				-1.1
1,050,080	+				-0.9
1,050,081	-				+0.8
1,050,081	-				-2.4
1,050,081	-				+0.2
1,050,081	-				-0.5
1,050,081	-				-1.3
1,050,088	+				+1.5
1,050,089	-				+0.5
1,050,089	-				+0.6
1,050,135	+				+1.5
1,050,366	+		Pf6N2E2_897	0.35	-0.1
1,050,442	+		Pf6N2E2_897	0.46	-0.5
1,050,442	+		Pf6N2E2_897	0.46	+0.5
1,050,442	+		Pf6N2E2_897	0.46	-0.1
1,050,443	-		Pf6N2E2_897	0.46	-0.9
1,050,443	-		Pf6N2E2_897	0.46	-0.5
1,050,443	-		Pf6N2E2_897	0.46	+0.5
1,050,469	+		Pf6N2E2_897	0.49	-1.6
1,050,619	+		Pf6N2E2_897	0.69	-0.7
1,050,620	-		Pf6N2E2_897	0.69	-1.2
1,050,620	-		Pf6N2E2_897	0.69	+0.8
1,050,620	-		Pf6N2E2_897	0.69	-0.1
1,050,766	+		Pf6N2E2_897	0.89	-0.6
1,050,946	+				+0.0
1,050,947	-				-1.7
1,051,324	+		Pf6N2E2_898	0.34	+1.5
1,051,325	-		Pf6N2E2_898	0.34	-1.9
1,051,405	+		Pf6N2E2_898	0.40	+0.8
1,051,405	+		Pf6N2E2_898	0.40	+1.0
1,051,405	+		Pf6N2E2_898	0.40	+0.8
1,051,441	+		Pf6N2E2_898	0.43	+0.3
1,051,441	+		Pf6N2E2_898	0.43	-0.1
1,051,441	+		Pf6N2E2_898	0.43	+0.5
1,051,441	+		Pf6N2E2_898	0.43	+0.3
1,051,441	+		Pf6N2E2_898	0.43	-0.3
1,051,441	+		Pf6N2E2_898	0.43	+0.9
1,051,442	-		Pf6N2E2_898	0.43	+0.5
1,051,442	-		Pf6N2E2_898	0.43	+0.5
1,051,442	-		Pf6N2E2_898	0.43	+0.4
1,051,442	-		Pf6N2E2_898	0.43	+0.5
1,051,442	-		Pf6N2E2_898	0.43	-0.8
1,051,442	-		Pf6N2E2_898	0.43	-2.2
1,051,442	-		Pf6N2E2_898	0.43	+0.4
1,051,484	+		Pf6N2E2_898	0.46	-0.6
1,051,490	-		Pf6N2E2_898	0.47	+1.5
1,051,490	-		Pf6N2E2_898	0.47	-0.1
1,051,536	-		Pf6N2E2_898	0.50	+0.5
1,051,609	+		Pf6N2E2_898	0.56	-0.3
1,051,610	-		Pf6N2E2_898	0.56	-1.1
1,051,610	-		Pf6N2E2_898	0.56	+0.6
1,051,627	+		Pf6N2E2_898	0.57	-0.5
1,051,627	+		Pf6N2E2_898	0.57	+0.3
1,051,628	-		Pf6N2E2_898	0.57	+0.5
1,051,628	-		Pf6N2E2_898	0.57	+0.0
1,051,628	-		Pf6N2E2_898	0.57	+1.5
1,051,628	-		Pf6N2E2_898	0.57	-1.1