Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4237

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
4,927,600	+		Pf6N2E2_4236	0.17	+0.0
4,927,600	+		Pf6N2E2_4236	0.17	-0.9
4,927,600	+		Pf6N2E2_4236	0.17	+0.2
4,927,601	-		Pf6N2E2_4236	0.17	-0.8
4,927,631	+		Pf6N2E2_4236	0.20	+0.4
4,927,631	+		Pf6N2E2_4236	0.20	-0.0
4,927,631	+		Pf6N2E2_4236	0.20	-0.2
4,927,631	+		Pf6N2E2_4236	0.20	+0.6
4,927,631	+		Pf6N2E2_4236	0.20	+0.3
4,927,631	+		Pf6N2E2_4236	0.20	+3.5
4,927,631	+		Pf6N2E2_4236	0.20	-0.3
4,927,632	-		Pf6N2E2_4236	0.20	-0.0
4,927,632	-		Pf6N2E2_4236	0.20	+0.4
4,927,745	+		Pf6N2E2_4236	0.30	-1.1
4,927,746	-		Pf6N2E2_4236	0.30	-1.4
4,927,746	-		Pf6N2E2_4236	0.30	-0.4
4,927,746	-		Pf6N2E2_4236	0.30	-1.1
4,927,925	+		Pf6N2E2_4236	0.46	-1.4
4,927,925	+		Pf6N2E2_4236	0.46	-0.5
4,927,925	+		Pf6N2E2_4236	0.46	-0.9
4,927,925	+		Pf6N2E2_4236	0.46	-0.8
4,927,925	+		Pf6N2E2_4236	0.46	-0.9
4,927,925	+		Pf6N2E2_4236	0.46	-2.3
4,927,926	-		Pf6N2E2_4236	0.46	+0.2
4,927,926	-		Pf6N2E2_4236	0.46	+0.1
4,927,928	+		Pf6N2E2_4236	0.46	+0.8
4,928,034	-		Pf6N2E2_4236	0.55	+0.1
4,928,082	+		Pf6N2E2_4236	0.60	+1.5
4,928,090	+		Pf6N2E2_4236	0.60	-1.5
4,928,090	+		Pf6N2E2_4236	0.60	+1.8
4,928,090	+		Pf6N2E2_4236	0.60	-0.6
4,928,090	+		Pf6N2E2_4236	0.60	+1.3
4,928,090	+		Pf6N2E2_4236	0.60	+0.7
4,928,090	+		Pf6N2E2_4236	0.60	+0.5
4,928,090	+		Pf6N2E2_4236	0.60	+1.3
4,928,091	-		Pf6N2E2_4236	0.60	+0.6
4,928,091	-		Pf6N2E2_4236	0.60	+1.2
4,928,091	-		Pf6N2E2_4236	0.60	-2.5
4,928,091	-		Pf6N2E2_4236	0.60	+0.5
4,928,091	-		Pf6N2E2_4236	0.60	+0.6
4,928,091	-		Pf6N2E2_4236	0.60	-0.2
4,928,091	-		Pf6N2E2_4236	0.60	-1.1
4,928,091	-		Pf6N2E2_4236	0.60	-0.3
4,928,091	-		Pf6N2E2_4236	0.60	-0.4
4,928,091	-		Pf6N2E2_4236	0.60	-0.7
4,928,196	-		Pf6N2E2_4236	0.70	-0.1
4,928,196	-		Pf6N2E2_4236	0.70	-1.3
4,928,207	+		Pf6N2E2_4236	0.71	-0.0
4,928,207	+		Pf6N2E2_4236	0.71	+2.2
4,928,208	-		Pf6N2E2_4236	0.71	-0.0
4,928,267	+		Pf6N2E2_4236	0.76	+0.2
4,928,267	+		Pf6N2E2_4236	0.76	-0.1
4,928,267	+		Pf6N2E2_4236	0.76	+1.2
4,928,321	+		Pf6N2E2_4236	0.81	-0.7
4,928,321	+		Pf6N2E2_4236	0.81	+0.4
4,928,321	+		Pf6N2E2_4236	0.81	+1.2
4,928,344	+		Pf6N2E2_4236	0.83	-0.2
4,928,344	+		Pf6N2E2_4236	0.83	-0.3
4,928,345	-		Pf6N2E2_4236	0.83	+0.3
4,928,510	+				-2.0
4,928,511	-				+0.1
4,928,511	-				+0.5
4,928,511	-				-0.5
4,928,520	-				-0.7
4,928,711	+		Pf6N2E2_4237	0.15	-0.3
4,928,711	+		Pf6N2E2_4237	0.15	+1.2
4,928,711	+		Pf6N2E2_4237	0.15	-0.4
4,928,712	-		Pf6N2E2_4237	0.15	-0.4
4,928,816	+		Pf6N2E2_4237	0.24	+0.0
4,928,816	+		Pf6N2E2_4237	0.24	+0.7
4,928,817	-		Pf6N2E2_4237	0.25	+0.3
4,928,817	-		Pf6N2E2_4237	0.25	-3.0
4,928,819	+		Pf6N2E2_4237	0.25	-0.1
4,928,819	+		Pf6N2E2_4237	0.25	-1.0
4,928,854	+		Pf6N2E2_4237	0.28	-0.9
4,928,854	+		Pf6N2E2_4237	0.28	-1.8
4,928,855	-		Pf6N2E2_4237	0.28	-0.7
4,928,855	-		Pf6N2E2_4237	0.28	-1.0
4,928,882	+		Pf6N2E2_4237	0.30	-1.2
4,928,882	+		Pf6N2E2_4237	0.30	+0.2
4,928,965	+		Pf6N2E2_4237	0.38	-0.0
4,928,965	+		Pf6N2E2_4237	0.38	-1.0
4,928,966	-		Pf6N2E2_4237	0.38	-0.4
4,928,966	-		Pf6N2E2_4237	0.38	-0.5
4,928,992	+		Pf6N2E2_4237	0.40	-0.6
4,928,992	+		Pf6N2E2_4237	0.40	-0.7
4,928,992	+		Pf6N2E2_4237	0.40	-1.4
4,928,992	+		Pf6N2E2_4237	0.40	-0.7
4,928,993	-		Pf6N2E2_4237	0.40	-1.1
4,929,067	+		Pf6N2E2_4237	0.47	-0.1
4,929,067	+		Pf6N2E2_4237	0.47	+1.6
4,929,067	+		Pf6N2E2_4237	0.47	-0.1
4,929,067	+		Pf6N2E2_4237	0.47	+0.5
4,929,067	+		Pf6N2E2_4237	0.47	-0.2
4,929,068	-		Pf6N2E2_4237	0.47	-1.0
4,929,068	-		Pf6N2E2_4237	0.47	+2.8
4,929,068	-		Pf6N2E2_4237	0.47	-0.2
4,929,068	-		Pf6N2E2_4237	0.47	-1.4
4,929,068	-		Pf6N2E2_4237	0.47	-0.5
4,929,068	-		Pf6N2E2_4237	0.47	+0.2
4,929,068	-		Pf6N2E2_4237	0.47	-0.5
4,929,068	-		Pf6N2E2_4237	0.47	-0.5
4,929,068	-		Pf6N2E2_4237	0.47	-0.2
4,929,074	+		Pf6N2E2_4237	0.47	+0.6
4,929,075	-		Pf6N2E2_4237	0.47	-0.4
4,929,075	-		Pf6N2E2_4237	0.47	-0.2
4,929,075	-		Pf6N2E2_4237	0.47	-0.8
4,929,106	+		Pf6N2E2_4237	0.50	-1.2
4,929,106	+		Pf6N2E2_4237	0.50	-0.3
4,929,106	+		Pf6N2E2_4237	0.50	-1.2
4,929,106	+		Pf6N2E2_4237	0.50	-0.8
4,929,107	-		Pf6N2E2_4237	0.50	-0.5
4,929,107	-		Pf6N2E2_4237	0.50	-1.2
4,929,395	+		Pf6N2E2_4237	0.76	-0.3
4,929,395	+		Pf6N2E2_4237	0.76	-0.3
4,929,395	+		Pf6N2E2_4237	0.76	-0.4
4,929,395	+		Pf6N2E2_4237	0.76	-0.2
4,929,396	-		Pf6N2E2_4237	0.76	-0.3
4,929,462	-		Pf6N2E2_4237	0.82	-0.3
4,929,526	+		Pf6N2E2_4237	0.87	+0.8
4,929,527	-		Pf6N2E2_4237	0.87	-0.9
4,929,527	-		Pf6N2E2_4237	0.87	-1.1
4,929,527	-		Pf6N2E2_4237	0.87	-0.5
4,929,611	+				-2.3
4,929,611	+				-0.3
4,929,611	+				-1.1
4,929,612	-				-0.8
4,929,612	-				-0.4
4,929,612	-				+1.0
4,929,612	-				-0.5
4,929,612	-				+0.3
4,929,612	-				+0.7
4,929,612	-				-0.1
4,929,661	+				-0.2
4,929,720	+				+0.9
4,929,720	+				-0.3
4,929,721	-				-0.2
4,929,797	+		Pf6N2E2_4238	0.10	+0.0
4,929,797	+		Pf6N2E2_4238	0.10	+1.0
4,929,798	-		Pf6N2E2_4238	0.10	-0.3
4,929,853	+		Pf6N2E2_4238	0.14	-0.8
4,929,853	+		Pf6N2E2_4238	0.14	-0.7
4,929,853	+		Pf6N2E2_4238	0.14	+0.7
4,929,853	+		Pf6N2E2_4238	0.14	-0.1
4,929,854	-		Pf6N2E2_4238	0.14	+0.2
4,929,961	+		Pf6N2E2_4238	0.22	-0.3
4,929,961	+		Pf6N2E2_4238	0.22	-0.0
4,929,961	+		Pf6N2E2_4238	0.22	+1.5
4,929,961	+		Pf6N2E2_4238	0.22	-0.0
4,929,961	+		Pf6N2E2_4238	0.22	+0.3
4,929,962	-		Pf6N2E2_4238	0.22	+0.5
4,929,962	-		Pf6N2E2_4238	0.22	+0.2
4,929,962	-		Pf6N2E2_4238	0.22	-0.6
4,929,962	-		Pf6N2E2_4238	0.22	-1.6
4,930,039	-		Pf6N2E2_4238	0.28	-0.8
4,930,039	-		Pf6N2E2_4238	0.28	-0.5
4,930,039	-		Pf6N2E2_4238	0.28	+0.1
4,930,039	-		Pf6N2E2_4238	0.28	-2.3
4,930,046	+		Pf6N2E2_4238	0.28	+0.1
4,930,070	+		Pf6N2E2_4238	0.30	-0.4
4,930,071	-		Pf6N2E2_4238	0.30	-0.9
4,930,071	-		Pf6N2E2_4238	0.30	-0.8
4,930,071	-		Pf6N2E2_4238	0.30	+1.2
4,930,071	-		Pf6N2E2_4238	0.30	+0.7
4,930,172	-		Pf6N2E2_4238	0.37	+0.2
4,930,306	+		Pf6N2E2_4238	0.47	+2.2
4,930,326	+		Pf6N2E2_4238	0.49	+0.2
4,930,326	+		Pf6N2E2_4238	0.49	+2.8
4,930,327	-		Pf6N2E2_4238	0.49	+1.2
4,930,327	-		Pf6N2E2_4238	0.49	-1.0
4,930,327	-		Pf6N2E2_4238	0.49	-0.1
4,930,400	-		Pf6N2E2_4238	0.54	-0.3
4,930,400	-		Pf6N2E2_4238	0.54	+0.6
4,930,400	-		Pf6N2E2_4238	0.54	-0.3
4,930,557	-		Pf6N2E2_4238	0.66	+0.5
4,930,629	-		Pf6N2E2_4238	0.71	-0.0
4,930,668	+		Pf6N2E2_4238	0.74	-0.3
4,930,669	-		Pf6N2E2_4238	0.74	+0.3