Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3733

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
4,345,026	+				+0.7
4,345,026	+				+2.8
4,345,026	+				+0.0
4,345,027	-				+0.3
4,345,031	+				-0.7
4,345,031	+				+0.3
4,345,031	+				+0.3
4,345,031	+				+0.3
4,345,031	+				-0.2
4,345,031	+				-1.0
4,345,031	+				-0.3
4,345,031	+				-1.0
4,345,031	+				+0.3
4,345,031	+				-0.5
4,345,032	-				-0.7
4,345,032	-				-0.3
4,345,032	-				-0.5
4,345,032	-				+1.4
4,345,032	-				-0.4
4,345,032	-				-1.6
4,345,033	+				-0.3
4,345,034	-				-0.1
4,345,103	-				+2.3
4,345,133	+				+1.0
4,345,133	+				+0.5
4,345,134	-				+0.4
4,345,134	-				+0.1
4,345,134	-				-0.2
4,345,134	-				+0.3
4,345,176	-		Pf6N2E2_3732	0.15	-0.2
4,345,197	-		Pf6N2E2_3732	0.18	+0.3
4,345,245	-		Pf6N2E2_3732	0.24	+0.8
4,345,259	+		Pf6N2E2_3732	0.26	-0.6
4,345,259	+		Pf6N2E2_3732	0.26	+0.5
4,345,260	-		Pf6N2E2_3732	0.26	+0.7
4,345,283	-		Pf6N2E2_3732	0.29	+0.0
4,345,331	+		Pf6N2E2_3732	0.35	+0.0
4,345,331	+		Pf6N2E2_3732	0.35	+0.4
4,345,331	+		Pf6N2E2_3732	0.35	-0.2
4,345,332	-		Pf6N2E2_3732	0.35	+2.3
4,345,386	-		Pf6N2E2_3732	0.42	+0.1
4,345,563	+		Pf6N2E2_3732	0.64	+1.3
4,345,564	-		Pf6N2E2_3732	0.64	+0.4
4,345,706	+		Pf6N2E2_3732	0.82	+0.4
4,345,709	-		Pf6N2E2_3732	0.83	+0.7
4,345,730	+		Pf6N2E2_3732	0.85	+0.1
4,345,746	+		Pf6N2E2_3732	0.87	-0.7
4,345,747	-		Pf6N2E2_3732	0.88	-0.4
4,345,754	+		Pf6N2E2_3732	0.88	-0.4
4,345,755	-		Pf6N2E2_3732	0.89	-0.1
4,345,755	-		Pf6N2E2_3732	0.89	-0.1
4,345,755	-		Pf6N2E2_3732	0.89	+0.2
4,345,835	+				-2.8
4,345,899	+				+0.9
4,345,900	-				+0.2
4,345,900	-				-0.2
4,345,904	-				+0.8
4,345,946	-				+0.9
4,345,946	-				+0.3
4,345,949	+				-1.2
4,345,949	+				+0.5
4,345,949	+				+1.3
4,345,949	+				-1.7
4,345,949	+				+1.3
4,345,949	+				+0.1
4,345,949	+				-1.2
4,345,949	+				+0.2
4,345,949	+				-0.5
4,345,949	+				-0.7
4,345,949	+				+0.3
4,345,949	+				+0.1
4,345,949	+				+0.1
4,345,949	+				-0.7
4,345,949	+				+0.1
4,345,949	+				+0.4
4,345,950	-				-0.0
4,345,950	-				-0.1
4,345,950	-				-0.6
4,345,950	-				+1.7
4,345,950	-				-1.1
4,345,950	-				+1.3
4,345,950	-				-0.8
4,345,950	-				+1.3
4,345,951	+				-0.8
4,345,951	+				+0.9
4,345,951	+				-0.2
4,345,953	+				-1.1
4,345,953	+				+0.4
4,345,953	+				+0.8
4,345,954	-				+0.2
4,345,954	-				-0.4
4,345,954	-				+1.3
4,345,980	+				+0.7
4,345,980	+				-0.7
4,345,981	-				-0.6
4,345,981	-				-0.7
4,345,981	-				-0.2
4,345,981	-				-2.2
4,345,981	-				+1.3
4,345,981	-				+0.2
4,346,037	-				-0.7
4,346,037	-				+0.6
4,346,060	+				-0.5
4,346,060	+				+0.6
4,346,061	-				-0.6
4,346,061	-				-0.7
4,346,204	+				-0.0
4,346,367	+				-0.8
4,346,367	+				+0.4
4,346,367	+				+0.4
4,346,367	+				+0.0
4,346,367	+				-0.8
4,346,368	-				-1.7
4,346,369	+				+0.3
4,346,369	+				-0.5
4,346,369	+				+1.3
4,346,369	+				+0.3
4,346,369	+				-0.7
4,346,369	+				-0.5
4,346,370	-				+0.3
4,346,370	-				-0.5
4,346,370	-				+0.9
4,346,370	-				+0.6
4,346,370	-				+0.4
4,346,370	-				+0.4
4,346,370	-				-0.2
4,346,370	-				-1.0
4,346,370	-				+1.3
4,346,370	-				-0.3
4,346,370	-				+0.2
4,346,370	-				+0.0
4,346,421	+				-0.2
4,346,421	+				+0.9
4,346,456	+		Pf6N2E2_3733	0.11	+1.3
4,346,456	+		Pf6N2E2_3733	0.11	+0.3
4,346,456	+		Pf6N2E2_3733	0.11	-0.2
4,346,476	+		Pf6N2E2_3733	0.11	-1.1
4,346,722	+		Pf6N2E2_3733	0.17	-0.5
4,346,722	+		Pf6N2E2_3733	0.17	+0.2
4,346,733	+		Pf6N2E2_3733	0.18	+1.3
4,346,733	+		Pf6N2E2_3733	0.18	-0.2
4,346,733	+		Pf6N2E2_3733	0.18	+0.2
4,346,830	+		Pf6N2E2_3733	0.20	-0.9
4,346,830	+		Pf6N2E2_3733	0.20	-0.3
4,346,831	-		Pf6N2E2_3733	0.20	+0.9
4,346,831	-		Pf6N2E2_3733	0.20	+0.3
4,346,831	-		Pf6N2E2_3733	0.20	-0.3
4,346,902	-		Pf6N2E2_3733	0.22	-0.1
4,346,911	+		Pf6N2E2_3733	0.22	-0.8
4,346,912	-		Pf6N2E2_3733	0.22	-0.0
4,346,912	-		Pf6N2E2_3733	0.22	-0.2
4,346,953	+		Pf6N2E2_3733	0.23	+0.2
4,346,953	+		Pf6N2E2_3733	0.23	-0.6
4,346,954	-		Pf6N2E2_3733	0.23	+0.1
4,347,002	+		Pf6N2E2_3733	0.24	+0.1
4,347,002	+		Pf6N2E2_3733	0.24	-1.7
4,347,002	+		Pf6N2E2_3733	0.24	-0.6
4,347,002	+		Pf6N2E2_3733	0.24	-0.1
4,347,003	-		Pf6N2E2_3733	0.24	-0.7
4,347,328	+		Pf6N2E2_3733	0.32	+0.7
4,347,328	+		Pf6N2E2_3733	0.32	-1.0
4,347,329	-		Pf6N2E2_3733	0.32	+0.3
4,347,354	-		Pf6N2E2_3733	0.33	-0.7
4,347,690	+		Pf6N2E2_3733	0.41	+0.3
4,347,690	+		Pf6N2E2_3733	0.41	+0.4
4,347,690	+		Pf6N2E2_3733	0.41	-0.8
4,347,690	+		Pf6N2E2_3733	0.41	+1.5
4,347,691	-		Pf6N2E2_3733	0.41	+0.1
4,347,692	+		Pf6N2E2_3733	0.41	-0.1
4,347,692	+		Pf6N2E2_3733	0.41	-0.0
4,347,692	+		Pf6N2E2_3733	0.41	-1.6
4,347,693	-		Pf6N2E2_3733	0.41	+1.3
4,347,693	-		Pf6N2E2_3733	0.41	-2.3
4,347,705	+		Pf6N2E2_3733	0.42	-0.3
4,347,705	+		Pf6N2E2_3733	0.42	+0.6
4,347,705	+		Pf6N2E2_3733	0.42	-0.8
4,347,706	-		Pf6N2E2_3733	0.42	-1.1
4,347,869	+		Pf6N2E2_3733	0.46	+0.5
4,347,895	+		Pf6N2E2_3733	0.46	-2.6
4,348,100	+		Pf6N2E2_3733	0.51	-0.3
4,348,345	+		Pf6N2E2_3733	0.57	+0.3
4,348,572	+		Pf6N2E2_3733	0.63	+2.8
4,348,651	+		Pf6N2E2_3733	0.65	-0.2
4,348,651	+		Pf6N2E2_3733	0.65	-0.4
4,348,652	-		Pf6N2E2_3733	0.65	-1.1
4,348,676	-		Pf6N2E2_3733	0.65	+0.1
4,348,696	+		Pf6N2E2_3733	0.66	-0.1
4,348,697	-		Pf6N2E2_3733	0.66	-0.1
4,348,697	-		Pf6N2E2_3733	0.66	-0.5
4,348,732	-		Pf6N2E2_3733	0.67	-1.4
4,348,736	-		Pf6N2E2_3733	0.67	-0.7
4,348,836	+		Pf6N2E2_3733	0.69	+0.3
4,348,836	+		Pf6N2E2_3733	0.69	+0.8
4,348,836	+		Pf6N2E2_3733	0.69	+0.3
4,348,836	+		Pf6N2E2_3733	0.69	-0.4
4,348,836	+		Pf6N2E2_3733	0.69	+0.4
4,348,836	+		Pf6N2E2_3733	0.69	+2.8
4,348,836	+		Pf6N2E2_3733	0.69	+1.3
4,348,837	-		Pf6N2E2_3733	0.69	-0.4
4,348,837	-		Pf6N2E2_3733	0.69	-1.8
4,348,837	-		Pf6N2E2_3733	0.69	-0.6
4,348,837	-		Pf6N2E2_3733	0.69	+0.4
4,348,837	-		Pf6N2E2_3733	0.69	-0.5
4,348,879	+		Pf6N2E2_3733	0.70	-0.4
4,348,879	+		Pf6N2E2_3733	0.70	+0.7
4,348,879	+		Pf6N2E2_3733	0.70	+0.3
4,348,879	+		Pf6N2E2_3733	0.70	-0.6
4,348,880	-		Pf6N2E2_3733	0.70	-0.4
4,348,880	-		Pf6N2E2_3733	0.70	+1.3
4,348,880	-		Pf6N2E2_3733	0.70	-2.9
4,348,880	-		Pf6N2E2_3733	0.70	+0.5
4,348,880	-		Pf6N2E2_3733	0.70	-0.8
4,348,941	+		Pf6N2E2_3733	0.72	-0.2
4,348,942	-		Pf6N2E2_3733	0.72	-1.1
4,348,942	-		Pf6N2E2_3733	0.72	-0.2
4,348,946	+		Pf6N2E2_3733	0.72	+0.5
4,348,946	+		Pf6N2E2_3733	0.72	+0.3
4,349,029	-		Pf6N2E2_3733	0.74	-0.5
4,349,030	+		Pf6N2E2_3733	0.74	+0.5
4,349,030	+		Pf6N2E2_3733	0.74	-0.5
4,349,031	-		Pf6N2E2_3733	0.74	+0.3
4,349,031	-		Pf6N2E2_3733	0.74	+0.3
4,349,031	-		Pf6N2E2_3733	0.74	-0.1
4,349,038	+		Pf6N2E2_3733	0.74	-0.5
4,349,038	+		Pf6N2E2_3733	0.74	+0.4
4,349,038	+		Pf6N2E2_3733	0.74	-0.1
4,349,038	+		Pf6N2E2_3733	0.74	+0.1
4,349,039	-		Pf6N2E2_3733	0.74	-0.6
4,349,039	-		Pf6N2E2_3733	0.74	-0.2
4,349,039	-		Pf6N2E2_3733	0.74	-0.7
4,349,039	-		Pf6N2E2_3733	0.74	+1.0
4,349,039	-		Pf6N2E2_3733	0.74	-0.5
4,349,039	-		Pf6N2E2_3733	0.74	-0.4
4,349,039	-		Pf6N2E2_3733	0.74	+0.3
4,349,039	-		Pf6N2E2_3733	0.74	+0.3
4,349,039	-		Pf6N2E2_3733	0.74	-0.1
4,349,091	+		Pf6N2E2_3733	0.76	-0.1
4,349,091	+		Pf6N2E2_3733	0.76	+0.8
4,349,091	+		Pf6N2E2_3733	0.76	-0.2
4,349,091	+		Pf6N2E2_3733	0.76	-0.1
4,349,091	+		Pf6N2E2_3733	0.76	-0.5
4,349,091	+		Pf6N2E2_3733	0.76	+0.3
4,349,091	+		Pf6N2E2_3733	0.76	+0.0
4,349,091	+		Pf6N2E2_3733	0.76	+0.1
4,349,091	+		Pf6N2E2_3733	0.76	-0.5
4,349,091	+		Pf6N2E2_3733	0.76	-0.2
4,349,091	+		Pf6N2E2_3733	0.76	-0.2
4,349,091	+		Pf6N2E2_3733	0.76	+0.6
4,349,091	+		Pf6N2E2_3733	0.76	-1.1
4,349,091	+		Pf6N2E2_3733	0.76	-0.7
4,349,092	-		Pf6N2E2_3733	0.76	+1.3
4,349,092	-		Pf6N2E2_3733	0.76	+1.3
4,349,092	-		Pf6N2E2_3733	0.76	-1.1
4,349,092	-		Pf6N2E2_3733	0.76	+0.3
4,349,092	-		Pf6N2E2_3733	0.76	+0.3
4,349,092	-		Pf6N2E2_3733	0.76	+0.1
4,349,092	-		Pf6N2E2_3733	0.76	-0.3
4,349,092	-		Pf6N2E2_3733	0.76	+0.2
4,349,092	-		Pf6N2E2_3733	0.76	+0.3
4,349,092	-		Pf6N2E2_3733	0.76	+0.3
4,349,116	+		Pf6N2E2_3733	0.76	-0.7
4,349,116	+		Pf6N2E2_3733	0.76	+0.3
4,349,116	+		Pf6N2E2_3733	0.76	+0.2
4,349,129	+		Pf6N2E2_3733	0.77	-0.2
4,349,129	+		Pf6N2E2_3733	0.77	-0.7
4,349,130	-		Pf6N2E2_3733	0.77	+0.7
4,349,146	+		Pf6N2E2_3733	0.77	+1.8
4,349,147	-		Pf6N2E2_3733	0.77	+0.3
4,349,175	-		Pf6N2E2_3733	0.78	+0.3
4,349,312	+		Pf6N2E2_3733	0.81	+0.1
4,349,312	+		Pf6N2E2_3733	0.81	-0.3
4,349,313	-		Pf6N2E2_3733	0.81	+0.3
4,349,313	-		Pf6N2E2_3733	0.81	+0.4
4,349,313	-		Pf6N2E2_3733	0.81	+0.1
4,349,366	+		Pf6N2E2_3733	0.82	-0.5
4,349,366	+		Pf6N2E2_3733	0.82	+0.4
4,349,366	+		Pf6N2E2_3733	0.82	-0.4
4,349,367	-		Pf6N2E2_3733	0.82	+0.4
4,349,377	-		Pf6N2E2_3733	0.83	-0.9
4,349,456	+		Pf6N2E2_3733	0.85	+0.9
4,349,457	-		Pf6N2E2_3733	0.85	-0.9
4,349,457	-		Pf6N2E2_3733	0.85	-0.1
4,349,457	-		Pf6N2E2_3733	0.85	-0.2
4,349,457	-		Pf6N2E2_3733	0.85	-1.1
4,349,476	+		Pf6N2E2_3733	0.85	-0.2
4,349,476	+		Pf6N2E2_3733	0.85	+0.4
4,349,477	-		Pf6N2E2_3733	0.85	-0.2
4,349,477	-		Pf6N2E2_3733	0.85	-0.4
4,349,478	+		Pf6N2E2_3733	0.85	+0.0
4,349,478	+		Pf6N2E2_3733	0.85	+0.4
4,349,478	+		Pf6N2E2_3733	0.85	-0.2
4,349,478	+		Pf6N2E2_3733	0.85	-1.4
4,349,479	-		Pf6N2E2_3733	0.85	-0.6
4,349,479	-		Pf6N2E2_3733	0.85	-0.1
4,349,479	-		Pf6N2E2_3733	0.85	-0.8
4,349,479	-		Pf6N2E2_3733	0.85	-1.1
4,349,479	-		Pf6N2E2_3733	0.85	+0.3
4,349,507	-		Pf6N2E2_3733	0.86	+0.3
4,349,599	+		Pf6N2E2_3733	0.88	+1.3
4,349,600	-		Pf6N2E2_3733	0.88	+0.3
4,349,600	-		Pf6N2E2_3733	0.88	+0.8
4,349,661	+		Pf6N2E2_3733	0.90	+0.3
4,349,690	-				+0.2
4,349,754	+				+1.7
4,349,775	-				-0.2
4,349,798	+				+0.3
4,349,849	-				+1.3
4,349,941	+				+0.1
4,349,942	-				-0.1
4,349,942	-				+0.5
4,349,942	-				-2.4
4,349,942	-				+1.0
4,349,942	-				+1.0
4,349,944	+				+0.3
4,349,944	+				-0.2
4,349,945	-				+0.5
4,349,945	-				-0.2
4,349,951	-				-0.9
4,350,030	-				+0.8
4,350,030	-				-2.6
4,350,043	+				-0.0
4,350,049	+				+0.1
4,350,049	+				-0.5
4,350,060	+				-0.3
4,350,079	+				+0.3
4,350,257	-				+0.3
4,350,257	-				+0.6
4,350,320	-				+0.7
4,350,320	-				+0.7
4,350,320	-				-2.7
4,350,320	-				-0.2
4,350,521	+		Pf6N2E2_3734	0.26	+2.3
4,350,522	-		Pf6N2E2_3734	0.26	+0.4
4,350,522	-		Pf6N2E2_3734	0.26	+1.7
4,350,522	-		Pf6N2E2_3734	0.26	+0.1
4,350,522	-		Pf6N2E2_3734	0.26	-0.2
4,350,526	+		Pf6N2E2_3734	0.27	-0.5
4,350,671	+		Pf6N2E2_3734	0.48	-1.0
4,350,672	-		Pf6N2E2_3734	0.48	+0.8
4,350,672	-		Pf6N2E2_3734	0.48	+0.3
4,350,675	+		Pf6N2E2_3734	0.48	+0.3
4,350,675	+		Pf6N2E2_3734	0.48	-0.9
4,350,675	+		Pf6N2E2_3734	0.48	-1.1
4,350,675	+		Pf6N2E2_3734	0.48	-0.1
4,350,675	+		Pf6N2E2_3734	0.48	+0.3
4,350,675	+		Pf6N2E2_3734	0.48	-0.6
4,350,675	+		Pf6N2E2_3734	0.48	+0.5
4,350,675	+		Pf6N2E2_3734	0.48	-0.2
4,350,675	+		Pf6N2E2_3734	0.48	+0.3
4,350,675	+		Pf6N2E2_3734	0.48	-0.4
4,350,675	+		Pf6N2E2_3734	0.48	+0.1
4,350,675	+		Pf6N2E2_3734	0.48	+0.3
4,350,675	+		Pf6N2E2_3734	0.48	+1.3
4,350,675	+		Pf6N2E2_3734	0.48	-0.7
4,350,675	+		Pf6N2E2_3734	0.48	+0.5
4,350,675	+		Pf6N2E2_3734	0.48	-0.5
4,350,675	+		Pf6N2E2_3734	0.48	+0.1
4,350,675	+		Pf6N2E2_3734	0.48	-0.4
4,350,675	+		Pf6N2E2_3734	0.48	-0.1
4,350,675	+		Pf6N2E2_3734	0.48	-0.3
4,350,675	+		Pf6N2E2_3734	0.48	+0.1
4,350,675	+		Pf6N2E2_3734	0.48	-0.7
4,350,676	-		Pf6N2E2_3734	0.48	+1.0
4,350,676	-		Pf6N2E2_3734	0.48	-0.6
4,350,676	-		Pf6N2E2_3734	0.48	-0.5
4,350,676	-		Pf6N2E2_3734	0.48	+0.3
4,350,676	-		Pf6N2E2_3734	0.48	-0.6
4,350,676	-		Pf6N2E2_3734	0.48	-0.1
4,350,676	-		Pf6N2E2_3734	0.48	-0.5
4,350,676	-		Pf6N2E2_3734	0.48	-0.6
4,350,676	-		Pf6N2E2_3734	0.48	+0.3
4,350,676	-		Pf6N2E2_3734	0.48	+0.5
4,350,676	-		Pf6N2E2_3734	0.48	+0.5
4,350,676	-		Pf6N2E2_3734	0.48	+0.1
4,350,676	-		Pf6N2E2_3734	0.48	+0.6
4,350,682	-		Pf6N2E2_3734	0.49	-0.4
4,350,704	+		Pf6N2E2_3734	0.52	+0.1
4,350,704	+		Pf6N2E2_3734	0.52	-0.7
4,350,705	-		Pf6N2E2_3734	0.52	-0.3
4,350,802	-		Pf6N2E2_3734	0.66	+0.4
4,350,912	+		Pf6N2E2_3734	0.82	-0.6
4,350,912	+		Pf6N2E2_3734	0.82	+1.3
4,350,912	+		Pf6N2E2_3734	0.82	-0.2
4,350,912	+		Pf6N2E2_3734	0.82	-0.5
4,350,912	+		Pf6N2E2_3734	0.82	+0.4
4,350,912	+		Pf6N2E2_3734	0.82	+0.4
4,350,912	+		Pf6N2E2_3734	0.82	-0.2
4,350,912	+		Pf6N2E2_3734	0.82	-0.0
4,350,913	-		Pf6N2E2_3734	0.82	+0.3
4,350,913	-		Pf6N2E2_3734	0.82	-0.9
4,350,913	-		Pf6N2E2_3734	0.82	+0.9
4,350,913	-		Pf6N2E2_3734	0.82	+0.1
4,350,913	-		Pf6N2E2_3734	0.82	+0.0
4,350,913	-		Pf6N2E2_3734	0.82	-1.2
4,350,984	+				-0.9
4,350,985	-				+0.5
4,351,036	+				+0.4
4,351,036	+				-0.9
4,351,038	+				-0.2
4,351,039	-				-0.8
4,351,039	-				+0.5
4,351,066	+				-1.0
4,351,076	+				-0.8