Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2994

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
3,485,466	+		Pf6N2E2_2993	0.47	+1.4
3,485,816	+		Pf6N2E2_2993	0.80	+1.4
3,485,953	-				+1.4
3,486,041	-				-0.3
3,486,041	-				+0.4
3,486,041	-				-1.1
3,486,041	-				-1.3
3,486,041	-				+1.1
3,486,131	+				+2.4
3,486,131	+				-1.0
3,486,302	+		Pf6N2E2_2994	0.38	+1.4
3,486,303	-		Pf6N2E2_2994	0.39	-1.3
3,486,340	+		Pf6N2E2_2994	0.46	-0.6
3,486,340	+		Pf6N2E2_2994	0.46	+0.4
3,486,450	+		Pf6N2E2_2994	0.68	-1.4
3,486,450	+		Pf6N2E2_2994	0.68	-1.2
3,486,450	+		Pf6N2E2_2994	0.68	-1.0
3,486,450	+		Pf6N2E2_2994	0.68	-1.3
3,486,450	+		Pf6N2E2_2994	0.68	-0.2
3,486,450	+		Pf6N2E2_2994	0.68	-0.1
3,486,451	-		Pf6N2E2_2994	0.68	-2.7
3,486,451	-		Pf6N2E2_2994	0.68	-1.6
3,486,459	+		Pf6N2E2_2994	0.70	-1.2
3,486,460	-		Pf6N2E2_2994	0.70	-1.6
3,486,460	-		Pf6N2E2_2994	0.70	+0.4
3,486,460	-		Pf6N2E2_2994	0.70	-1.6
3,486,460	-		Pf6N2E2_2994	0.70	-2.9
3,486,460	-		Pf6N2E2_2994	0.70	+0.4
3,486,643	-				+1.4
3,486,647	+				+0.1
3,486,647	+				-1.2
3,486,648	-				-0.7
3,486,648	-				+0.2
3,486,702	+				-2.3
3,486,702	+				-0.4
3,486,702	+				+1.2
3,486,702	+				-0.2
3,486,704	+				-0.4
3,486,704	+				-1.0
3,486,704	+				-1.6
3,486,704	+				-0.5
3,486,704	+				-0.2
3,486,705	-				+1.7
3,486,705	-				-0.1
3,486,705	-				-1.6
3,486,705	-				-0.7
3,486,705	-				-0.6
3,486,705	-				+0.4
3,486,903	+		Pf6N2E2_2995	0.41	+0.7
3,486,903	+		Pf6N2E2_2995	0.41	-0.6
3,486,904	-		Pf6N2E2_2995	0.41	+0.5
3,486,904	-		Pf6N2E2_2995	0.41	+0.3
3,486,933	+		Pf6N2E2_2995	0.47	-0.4
3,486,933	+		Pf6N2E2_2995	0.47	+0.1
3,486,933	+		Pf6N2E2_2995	0.47	+0.2
3,486,934	-		Pf6N2E2_2995	0.47	+1.3
3,487,219	-				+2.4
3,487,280	+		Pf6N2E2_2996	0.14	-0.5
3,487,436	+		Pf6N2E2_2996	0.42	+0.6
3,487,436	+		Pf6N2E2_2996	0.42	+2.0
3,487,436	+		Pf6N2E2_2996	0.42	-0.1
3,487,436	+		Pf6N2E2_2996	0.42	-1.2
3,487,437	-		Pf6N2E2_2996	0.42	-0.0
3,487,437	-		Pf6N2E2_2996	0.42	+0.9
3,487,447	+		Pf6N2E2_2996	0.44	-0.4
3,487,448	-		Pf6N2E2_2996	0.44	-0.2
3,487,448	-		Pf6N2E2_2996	0.44	-1.2
3,487,448	-		Pf6N2E2_2996	0.44	+0.5
3,487,490	-		Pf6N2E2_2996	0.51	-1.6
3,487,555	+		Pf6N2E2_2996	0.63	-0.3
3,487,555	+		Pf6N2E2_2996	0.63	-2.3
3,487,555	+		Pf6N2E2_2996	0.63	+0.2
3,487,555	+		Pf6N2E2_2996	0.63	-0.8
3,487,556	-		Pf6N2E2_2996	0.63	-0.0
3,487,556	-		Pf6N2E2_2996	0.63	-0.7
3,487,556	-		Pf6N2E2_2996	0.63	-1.4
3,487,567	+		Pf6N2E2_2996	0.65	+0.4
3,487,567	+		Pf6N2E2_2996	0.65	-0.2
3,487,594	+		Pf6N2E2_2996	0.70	+0.5
3,487,595	-		Pf6N2E2_2996	0.70	+0.0