Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2297

Experiment: Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
2,718,589	+		Pf6N2E2_2295	0.80	+0.9
2,718,589	+		Pf6N2E2_2295	0.80	-0.2
2,718,589	+		Pf6N2E2_2295	0.80	-0.2
2,718,589	+		Pf6N2E2_2295	0.80	-0.4
2,718,590	-		Pf6N2E2_2295	0.80	-1.1
2,718,590	-		Pf6N2E2_2295	0.80	-0.3
2,718,603	+		Pf6N2E2_2295	0.81	-0.5
2,718,622	-		Pf6N2E2_2295	0.82	-1.8
2,718,622	-		Pf6N2E2_2295	0.82	-1.2
2,718,622	-		Pf6N2E2_2295	0.82	+2.8
2,718,622	-		Pf6N2E2_2295	0.82	-0.2
2,718,622	-		Pf6N2E2_2295	0.82	-1.2
2,718,829	+				-0.7
2,718,829	+				+0.3
2,718,829	+				-0.2
2,718,829	+				-0.2
2,718,829	+				+0.4
2,718,830	-				+1.8
2,718,833	-				-1.6
2,718,911	+				-0.2
2,718,911	+				-1.0
2,718,911	+				+0.8
2,719,029	-				-0.2
2,719,032	+				-0.4
2,719,032	+				+1.4
2,719,033	-				+0.6
2,719,033	-				+1.1
2,719,054	+				-0.5
2,719,054	+				-0.1
2,719,054	+				-0.4
2,719,055	-				-0.2
2,719,128	+				-0.2
2,719,128	+				-1.2
2,719,128	+				-0.8
2,719,128	+				-0.2
2,719,128	+				+1.4
2,719,129	-				+2.0
2,719,129	-				+0.6
2,719,164	+				-1.7
2,719,164	+				-0.7
2,719,164	+				-0.5
2,719,170	-				+0.4
2,719,236	+		Pf6N2E2_2296	0.21	+0.8
2,719,236	+		Pf6N2E2_2296	0.21	-1.6
2,719,236	+		Pf6N2E2_2296	0.21	+1.4
2,719,299	+		Pf6N2E2_2296	0.56	-0.2
2,719,379	+				+0.2
2,719,423	+				-1.4
2,719,423	+				-0.5
2,719,423	+				-0.3
2,719,424	-				+0.3
2,719,424	-				-0.1
2,720,733	+				-1.2
2,720,734	-				-0.2
2,720,745	+				-0.6
2,720,912	+				+1.4
2,720,912	+				-1.7
2,720,912	+				+0.8
2,720,912	+				+0.5
2,720,913	-				-0.8
2,720,913	-				-1.3
2,720,931	-				+0.1
2,720,931	-				+1.7
2,720,976	+				-0.4
2,720,977	-				+1.4
2,720,977	-				+2.2
2,720,998	-				-0.3
2,720,998	-				-1.3
2,721,031	-				+1.0
2,721,443	+		Pf6N2E2_2298	0.27	+0.1
2,721,443	+		Pf6N2E2_2298	0.27	+1.9
2,721,444	-		Pf6N2E2_2298	0.27	+0.2
2,721,444	-		Pf6N2E2_2298	0.27	-0.2
2,721,485	+		Pf6N2E2_2298	0.30	-0.6
2,721,485	+		Pf6N2E2_2298	0.30	-1.6
2,721,486	-		Pf6N2E2_2298	0.30	-0.1
2,721,492	+		Pf6N2E2_2298	0.30	+0.5
2,721,492	+		Pf6N2E2_2298	0.30	+0.6
2,721,493	-		Pf6N2E2_2298	0.30	-1.1
2,721,493	-		Pf6N2E2_2298	0.30	-0.0
2,721,581	+		Pf6N2E2_2298	0.37	-0.2
2,721,581	+		Pf6N2E2_2298	0.37	+1.4
2,721,581	+		Pf6N2E2_2298	0.37	-0.8
2,721,581	+		Pf6N2E2_2298	0.37	-0.7
2,721,581	+		Pf6N2E2_2298	0.37	-0.6
2,721,581	+		Pf6N2E2_2298	0.37	+0.4
2,721,581	+		Pf6N2E2_2298	0.37	-0.9
2,721,582	-		Pf6N2E2_2298	0.37	+0.6
2,721,582	-		Pf6N2E2_2298	0.37	-0.7
2,721,582	-		Pf6N2E2_2298	0.37	+0.1
2,721,582	-		Pf6N2E2_2298	0.37	+1.0
2,721,582	-		Pf6N2E2_2298	0.37	-0.0
2,721,593	+		Pf6N2E2_2298	0.38	+0.4
2,721,593	+		Pf6N2E2_2298	0.38	-0.8
2,721,593	+		Pf6N2E2_2298	0.38	+0.1
2,721,593	+		Pf6N2E2_2298	0.38	+0.4
2,721,594	-		Pf6N2E2_2298	0.38	+0.2