Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS14610

Experiment: D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride
3,264,089	+		PFLU_RS14605	0.19	+1.7
3,264,089	+		PFLU_RS14605	0.19	-0.4
3,264,089	+		PFLU_RS14605	0.19	-0.2
3,264,089	+		PFLU_RS14605	0.19	+0.2
3,264,090	-		PFLU_RS14605	0.19	-0.2
3,264,090	-		PFLU_RS14605	0.19	-0.7
3,264,090	-		PFLU_RS14605	0.19	-1.7
3,264,090	-		PFLU_RS14605	0.19	+0.0
3,264,090	-		PFLU_RS14605	0.19	+0.8
3,264,162	+		PFLU_RS14605	0.27	+0.6
3,264,180	+		PFLU_RS14605	0.29	+1.2
3,264,180	+		PFLU_RS14605	0.29	+0.7
3,264,192	+		PFLU_RS14605	0.30	-0.5
3,264,192	+		PFLU_RS14605	0.30	+0.2
3,264,192	+		PFLU_RS14605	0.30	-2.1
3,264,193	-		PFLU_RS14605	0.30	+0.7
3,264,193	-		PFLU_RS14605	0.30	+0.7
3,264,193	-		PFLU_RS14605	0.30	+0.4
3,264,193	-		PFLU_RS14605	0.30	-0.8
3,264,193	-		PFLU_RS14605	0.30	+1.3
3,264,193	-		PFLU_RS14605	0.30	+3.0
3,264,266	-		PFLU_RS14605	0.38	-1.5
3,264,310	+		PFLU_RS14605	0.43	+0.8
3,264,311	-		PFLU_RS14605	0.43	-0.4
3,264,429	+		PFLU_RS14605	0.56	+2.3
3,264,429	+		PFLU_RS14605	0.56	-0.4
3,264,429	+		PFLU_RS14605	0.56	+1.2
3,264,429	+		PFLU_RS14605	0.56	+1.2
3,264,429	+		PFLU_RS14605	0.56	-1.7
3,264,429	+		PFLU_RS14605	0.56	+1.5
3,264,429	+		PFLU_RS14605	0.56	-1.4
3,264,429	+		PFLU_RS14605	0.56	-2.1
3,264,429	+		PFLU_RS14605	0.56	-0.7
3,264,429	+		PFLU_RS14605	0.56	+1.9
3,264,429	+		PFLU_RS14605	0.56	+1.3
3,264,430	-		PFLU_RS14605	0.56	+1.1
3,264,430	-		PFLU_RS14605	0.56	-0.8
3,264,430	-		PFLU_RS14605	0.56	-1.0
3,264,430	-		PFLU_RS14605	0.56	-0.7
3,264,430	-		PFLU_RS14605	0.56	-0.7
3,264,430	-		PFLU_RS14605	0.56	+0.6
3,264,430	-		PFLU_RS14605	0.56	-1.7
3,264,430	-		PFLU_RS14605	0.56	+2.4
3,264,430	-		PFLU_RS14605	0.56	-1.5
3,264,597	+		PFLU_RS14605	0.74	+0.7
3,264,597	+		PFLU_RS14605	0.74	-0.7
3,264,597	+		PFLU_RS14605	0.74	-1.0
3,264,598	-		PFLU_RS14605	0.74	-1.0
3,264,627	+		PFLU_RS14605	0.77	-1.4
3,264,627	+		PFLU_RS14605	0.77	-0.2
3,264,627	+		PFLU_RS14605	0.77	+0.3
3,264,627	+		PFLU_RS14605	0.77	+3.7
3,264,627	+		PFLU_RS14605	0.77	+0.4
3,264,627	+		PFLU_RS14605	0.77	-0.4
3,264,628	-		PFLU_RS14605	0.77	-0.4
3,264,628	-		PFLU_RS14605	0.77	+1.7
3,264,628	-		PFLU_RS14605	0.77	-0.3
3,264,628	-		PFLU_RS14605	0.77	+0.6
3,264,628	-		PFLU_RS14605	0.77	-0.5
3,264,628	-		PFLU_RS14605	0.77	+1.3
3,264,628	-		PFLU_RS14605	0.77	+1.1
3,264,628	-		PFLU_RS14605	0.77	+1.2
3,264,629	+		PFLU_RS14605	0.77	-0.2
3,264,630	-		PFLU_RS14605	0.78	-0.3
3,264,637	-		PFLU_RS14605	0.78	-1.5
3,264,639	+		PFLU_RS14605	0.79	-1.0
3,264,639	+		PFLU_RS14605	0.79	-0.4
3,264,639	+		PFLU_RS14605	0.79	+2.2
3,264,639	+		PFLU_RS14605	0.79	+2.4
3,264,639	+		PFLU_RS14605	0.79	-1.8
3,264,639	+		PFLU_RS14605	0.79	-1.0
3,264,639	+		PFLU_RS14605	0.79	+0.2
3,264,639	+		PFLU_RS14605	0.79	+1.2
3,264,639	+		PFLU_RS14605	0.79	+1.2
3,264,639	+		PFLU_RS14605	0.79	-0.2
3,264,639	+		PFLU_RS14605	0.79	-0.2
3,264,639	+		PFLU_RS14605	0.79	-1.5
3,264,640	-		PFLU_RS14605	0.79	+0.6
3,264,640	-		PFLU_RS14605	0.79	+2.8
3,264,640	-		PFLU_RS14605	0.79	+0.9
3,264,640	-		PFLU_RS14605	0.79	-0.6
3,264,640	-		PFLU_RS14605	0.79	-2.2
3,264,640	-		PFLU_RS14605	0.79	+0.2
3,264,640	-		PFLU_RS14605	0.79	+2.5
3,264,657	-		PFLU_RS14605	0.81	-1.8
3,264,657	-		PFLU_RS14605	0.81	+1.5
3,264,680	-		PFLU_RS14605	0.83	+2.9
3,264,692	+		PFLU_RS14605	0.84	+0.6
3,264,692	+		PFLU_RS14605	0.84	-1.7
3,264,789	+				-0.7
3,264,789	+				+2.0
3,264,789	+				+3.1
3,264,789	+				+0.0
3,264,789	+				-2.4
3,264,789	+				-0.2
3,264,789	+				+1.2
3,264,789	+				+3.7
3,264,789	+				+2.2
3,264,789	+				+1.3
3,264,789	+				+1.6
3,264,789	+				-1.4
3,264,789	+				-2.1
3,264,789	+				-1.0
3,264,789	+				-0.2
3,264,790	-				-1.2
3,264,790	-				+1.2
3,264,790	-				-1.2
3,264,790	-				+1.2
3,264,790	-				-1.0
3,264,790	-				-0.7
3,264,790	-				-0.5
3,264,790	-				+0.6
3,264,790	-				-0.0
3,264,790	-				+1.6
3,264,790	-				-1.0
3,264,790	-				+2.2
3,264,790	-				+1.0
3,264,790	-				+0.5
3,264,837	+				+1.6
3,264,838	-				-1.7
3,264,843	+				-0.8
3,264,843	+				-0.2
3,264,843	+				-1.0
3,264,843	+				+1.2
3,264,843	+				-0.8
3,264,844	-				-1.5
3,264,844	-				+0.9
3,264,844	-				+0.6
3,264,844	-				+0.3
3,264,844	-				+1.2
3,264,860	-				-1.4
3,264,860	-				+1.2
3,264,868	+				-0.4
3,264,880	-				-0.7
3,264,917	+				+2.0
3,264,917	+				+2.2
3,264,917	+				+0.9
3,264,917	+				-1.3
3,264,917	+				+1.2
3,264,917	+				+1.0
3,264,917	+				+0.6
3,264,918	-				+2.1
3,264,918	-				+0.8
3,264,918	-				-1.4
3,264,918	-				+2.2
3,264,949	+				+1.2
3,264,949	+				-1.8
3,264,949	+				-1.0
3,264,950	-				+1.2
3,264,950	-				-0.7
3,265,056	+				+2.5
3,265,056	+				-1.4
3,265,056	+				+1.0
3,265,056	+				+0.4
3,265,056	+				-0.7
3,265,057	-				+0.6
3,265,057	-				-1.8
3,265,057	-				-0.4
3,265,057	-				+0.7
3,265,091	+				+1.2
3,265,091	+				+0.2
3,265,091	+				-1.5
3,265,091	+				+3.1
3,265,092	-				-0.6
3,265,092	-				-1.4
3,265,092	-				+0.6
3,265,092	-				-1.0
3,265,092	-				-1.5
3,265,092	-				+1.3
3,265,092	-				+1.8
3,265,092	-				+1.9
3,265,094	-				+3.4
3,265,257	+		PFLU_RS14610	0.16	-2.3
3,265,257	+		PFLU_RS14610	0.16	+3.7
3,265,258	-		PFLU_RS14610	0.16	+0.6
3,265,258	-		PFLU_RS14610	0.16	+1.2
3,265,285	+		PFLU_RS14610	0.19	+1.1
3,265,285	+		PFLU_RS14610	0.19	+1.6
3,265,286	-		PFLU_RS14610	0.19	-0.8
3,265,286	-		PFLU_RS14610	0.19	-1.4
3,265,286	-		PFLU_RS14610	0.19	-2.1
3,265,286	-		PFLU_RS14610	0.19	+2.2
3,265,286	-		PFLU_RS14610	0.19	-0.4
3,265,354	+		PFLU_RS14610	0.25	+0.2
3,265,354	+		PFLU_RS14610	0.25	+1.6
3,265,354	+		PFLU_RS14610	0.25	+0.7
3,265,354	+		PFLU_RS14610	0.25	+2.5
3,265,354	+		PFLU_RS14610	0.25	+0.2
3,265,355	-		PFLU_RS14610	0.25	-1.2
3,265,355	-		PFLU_RS14610	0.25	-0.2
3,265,355	-		PFLU_RS14610	0.25	-1.3
3,265,355	-		PFLU_RS14610	0.25	-1.8
3,265,456	+		PFLU_RS14610	0.35	-0.8
3,265,456	+		PFLU_RS14610	0.35	-0.4
3,265,456	+		PFLU_RS14610	0.35	+3.2
3,265,456	+		PFLU_RS14610	0.35	+0.6
3,265,457	-		PFLU_RS14610	0.35	-1.3
3,265,493	-		PFLU_RS14610	0.38	+0.2
3,265,493	-		PFLU_RS14610	0.38	+0.5
3,265,493	-		PFLU_RS14610	0.38	-1.3
3,265,493	-		PFLU_RS14610	0.38	+0.7
3,265,493	-		PFLU_RS14610	0.38	+1.2
3,265,493	-		PFLU_RS14610	0.38	-1.2
3,265,493	-		PFLU_RS14610	0.38	+0.2
3,265,511	-		PFLU_RS14610	0.40	-0.4
3,265,600	+		PFLU_RS14610	0.48	+0.4
3,265,600	+		PFLU_RS14610	0.48	+1.2
3,265,601	-		PFLU_RS14610	0.48	-0.2
3,265,601	-		PFLU_RS14610	0.48	-2.2
3,265,615	+		PFLU_RS14610	0.50	-0.2
3,265,615	+		PFLU_RS14610	0.50	-2.0
3,265,615	+		PFLU_RS14610	0.50	+1.2
3,265,615	+		PFLU_RS14610	0.50	+0.2
3,265,615	+		PFLU_RS14610	0.50	-1.0
3,265,616	-		PFLU_RS14610	0.50	+1.3
3,265,648	+		PFLU_RS14610	0.53	+0.3
3,265,649	-		PFLU_RS14610	0.53	+1.9
3,265,649	-		PFLU_RS14610	0.53	-0.7
3,265,649	-		PFLU_RS14610	0.53	+1.5
3,265,669	+		PFLU_RS14610	0.55	+0.2
3,265,669	+		PFLU_RS14610	0.55	+0.2
3,265,669	+		PFLU_RS14610	0.55	+1.2
3,265,670	-		PFLU_RS14610	0.55	-0.3
3,265,670	-		PFLU_RS14610	0.55	-2.4
3,265,670	-		PFLU_RS14610	0.55	-1.8
3,265,670	-		PFLU_RS14610	0.55	-0.7
3,265,795	-		PFLU_RS14610	0.66	-2.0
3,265,795	-		PFLU_RS14610	0.66	-0.2
3,265,891	+		PFLU_RS14610	0.75	+0.8
3,265,891	+		PFLU_RS14610	0.75	+0.6
3,265,891	+		PFLU_RS14610	0.75	-1.4
3,265,892	-		PFLU_RS14610	0.75	-0.3
3,265,894	+		PFLU_RS14610	0.75	+1.5
3,265,894	+		PFLU_RS14610	0.75	-0.3
3,265,894	+		PFLU_RS14610	0.75	+1.7
3,265,895	-		PFLU_RS14610	0.76	-0.7
3,265,895	-		PFLU_RS14610	0.76	+2.2
3,265,895	-		PFLU_RS14610	0.76	-1.0
3,265,895	-		PFLU_RS14610	0.76	-0.4
3,266,141	+				+0.7
3,266,141	+				+0.3
3,266,142	-				+1.2
3,266,155	+				+0.3
3,266,166	-				+0.3
3,266,204	+				+2.2
3,266,225	+				+3.0
3,266,225	+				+0.7
3,266,293	+				-0.8
3,266,293	+				+0.6
3,266,293	+				+0.2
3,266,293	+				-0.4
3,266,293	+				+1.8
3,266,293	+				+1.4
3,266,293	+				+1.4
3,266,293	+				+0.2
3,266,293	+				+0.3
3,266,293	+				-1.3
3,266,293	+				+0.6
3,266,293	+				+1.2
3,266,293	+				-0.2
3,266,293	+				-1.7
3,266,293	+				-1.0
3,266,293	+				+0.2
3,266,294	-				-1.2
3,266,294	-				-0.8
3,266,294	-				+0.2
3,266,294	-				-1.5
3,266,294	-				+2.7
3,266,294	-				+1.9
3,266,294	-				-0.7
3,266,294	-				-0.7
3,266,368	+		PFLU_RS14615	0.17	-0.8
3,266,368	+		PFLU_RS14615	0.17	+0.6
3,266,368	+		PFLU_RS14615	0.17	-1.0
3,266,368	+		PFLU_RS14615	0.17	+2.2
3,266,368	+		PFLU_RS14615	0.17	+0.9
3,266,368	+		PFLU_RS14615	0.17	-0.8
3,266,368	+		PFLU_RS14615	0.17	+0.8
3,266,369	-		PFLU_RS14615	0.17	-0.2
3,266,369	-		PFLU_RS14615	0.17	+2.4
3,266,369	-		PFLU_RS14615	0.17	+2.0
3,266,369	-		PFLU_RS14615	0.17	-2.2
3,266,369	-		PFLU_RS14615	0.17	-0.7
3,266,417	+		PFLU_RS14615	0.23	+3.3
3,266,417	+		PFLU_RS14615	0.23	-0.4
3,266,417	+		PFLU_RS14615	0.23	-0.2
3,266,417	+		PFLU_RS14615	0.23	+1.2
3,266,417	+		PFLU_RS14615	0.23	-0.2
3,266,417	+		PFLU_RS14615	0.23	-0.4
3,266,417	+		PFLU_RS14615	0.23	-0.8
3,266,417	+		PFLU_RS14615	0.23	+1.9
3,266,417	+		PFLU_RS14615	0.23	-0.2
3,266,418	-		PFLU_RS14615	0.23	+3.0
3,266,418	-		PFLU_RS14615	0.23	+1.0
3,266,418	-		PFLU_RS14615	0.23	+1.0
3,266,418	-		PFLU_RS14615	0.23	+1.5
3,266,418	-		PFLU_RS14615	0.23	-0.7
3,266,418	-		PFLU_RS14615	0.23	-1.4
3,266,418	-		PFLU_RS14615	0.23	+0.0
3,266,418	-		PFLU_RS14615	0.23	+2.9
3,266,418	-		PFLU_RS14615	0.23	-0.4
3,266,418	-		PFLU_RS14615	0.23	-0.2
3,266,418	-		PFLU_RS14615	0.23	-0.5
3,266,418	-		PFLU_RS14615	0.23	+0.6
3,266,418	-		PFLU_RS14615	0.23	+1.9
3,266,418	-		PFLU_RS14615	0.23	-1.5
3,266,419	+		PFLU_RS14615	0.23	+0.8
3,266,419	+		PFLU_RS14615	0.23	-0.7
3,266,419	+		PFLU_RS14615	0.23	-0.2
3,266,419	+		PFLU_RS14615	0.23	+4.0
3,266,419	+		PFLU_RS14615	0.23	+0.6
3,266,419	+		PFLU_RS14615	0.23	-0.4
3,266,419	+		PFLU_RS14615	0.23	-0.2
3,266,419	+		PFLU_RS14615	0.23	+1.3
3,266,419	+		PFLU_RS14615	0.23	+1.2
3,266,419	+		PFLU_RS14615	0.23	-0.2
3,266,419	+		PFLU_RS14615	0.23	+0.2
3,266,419	+		PFLU_RS14615	0.23	+1.8
3,266,419	+		PFLU_RS14615	0.23	-0.7
3,266,419	+		PFLU_RS14615	0.23	-0.4
3,266,419	+		PFLU_RS14615	0.23	+4.5
3,266,419	+		PFLU_RS14615	0.23	+0.2
3,266,419	+		PFLU_RS14615	0.23	-1.2
3,266,419	+		PFLU_RS14615	0.23	+0.6
3,266,419	+		PFLU_RS14615	0.23	-0.7
3,266,419	+		PFLU_RS14615	0.23	-1.7
3,266,419	+		PFLU_RS14615	0.23	-1.7
3,266,420	-		PFLU_RS14615	0.23	+1.9
3,266,420	-		PFLU_RS14615	0.23	-2.3
3,266,420	-		PFLU_RS14615	0.23	-1.3
3,266,420	-		PFLU_RS14615	0.23	+1.7
3,266,420	-		PFLU_RS14615	0.23	-0.7
3,266,420	-		PFLU_RS14615	0.23	+2.3
3,266,420	-		PFLU_RS14615	0.23	-2.7
3,266,420	-		PFLU_RS14615	0.23	-1.4
3,266,420	-		PFLU_RS14615	0.23	+1.4
3,266,420	-		PFLU_RS14615	0.23	+0.8
3,266,420	-		PFLU_RS14615	0.23	+0.2
3,266,420	-		PFLU_RS14615	0.23	-0.2
3,266,420	-		PFLU_RS14615	0.23	+1.3
3,266,420	-		PFLU_RS14615	0.23	+0.7
3,266,420	-		PFLU_RS14615	0.23	+0.8
3,266,420	-		PFLU_RS14615	0.23	-0.7
3,266,420	-		PFLU_RS14615	0.23	-0.7
3,266,420	-		PFLU_RS14615	0.23	+0.2
3,266,420	-		PFLU_RS14615	0.23	+3.3
3,266,420	-		PFLU_RS14615	0.23	+3.1
3,266,420	-		PFLU_RS14615	0.23	-0.8
3,266,420	-		PFLU_RS14615	0.23	+0.9
3,266,420	-		PFLU_RS14615	0.23	-0.2
3,266,420	-		PFLU_RS14615	0.23	+0.2
3,266,456	+		PFLU_RS14615	0.27	-2.2
3,266,456	+		PFLU_RS14615	0.27	-1.3
3,266,456	+		PFLU_RS14615	0.27	-1.5
3,266,456	+		PFLU_RS14615	0.27	+2.2
3,266,456	+		PFLU_RS14615	0.27	-0.2
3,266,457	-		PFLU_RS14615	0.27	+2.2
3,266,457	-		PFLU_RS14615	0.27	-1.1
3,266,457	-		PFLU_RS14615	0.27	+0.5
3,266,470	+		PFLU_RS14615	0.29	+2.2
3,266,470	+		PFLU_RS14615	0.29	+2.6
3,266,470	+		PFLU_RS14615	0.29	-0.7
3,266,470	+		PFLU_RS14615	0.29	+0.6
3,266,471	-		PFLU_RS14615	0.29	+0.0
3,266,471	-		PFLU_RS14615	0.29	+0.8
3,266,471	-		PFLU_RS14615	0.29	-2.0
3,266,471	-		PFLU_RS14615	0.29	-1.3
3,266,594	-		PFLU_RS14615	0.43	+0.2
3,266,594	-		PFLU_RS14615	0.43	+0.6
3,266,594	-		PFLU_RS14615	0.43	-0.2
3,266,611	+		PFLU_RS14615	0.45	-0.3
3,266,611	+		PFLU_RS14615	0.45	+3.0
3,266,612	-		PFLU_RS14615	0.45	-1.5
3,266,612	-		PFLU_RS14615	0.45	+0.6
3,266,669	-		PFLU_RS14615	0.51	-0.8
3,266,669	-		PFLU_RS14615	0.51	+1.3
3,266,722	+		PFLU_RS14615	0.57	+0.6
3,266,722	+		PFLU_RS14615	0.57	-2.4
3,266,722	+		PFLU_RS14615	0.57	-0.4
3,266,722	+		PFLU_RS14615	0.57	-0.4
3,266,723	-		PFLU_RS14615	0.57	-1.0
3,266,742	+		PFLU_RS14615	0.60	+0.2
3,266,743	-		PFLU_RS14615	0.60	-0.4
3,266,785	+		PFLU_RS14615	0.64	+0.2
3,266,785	+		PFLU_RS14615	0.64	+5.2
3,266,831	+		PFLU_RS14615	0.70	+0.9
3,266,831	+		PFLU_RS14615	0.70	+0.2
3,266,831	+		PFLU_RS14615	0.70	+1.9
3,266,831	+		PFLU_RS14615	0.70	+1.0
3,266,831	+		PFLU_RS14615	0.70	-1.0
3,266,832	-		PFLU_RS14615	0.70	-1.4
3,266,832	-		PFLU_RS14615	0.70	+2.2
3,266,832	-		PFLU_RS14615	0.70	-0.8
3,266,832	-		PFLU_RS14615	0.70	+1.6
3,266,832	-		PFLU_RS14615	0.70	+1.3
3,266,832	-		PFLU_RS14615	0.70	-0.2
3,266,832	-		PFLU_RS14615	0.70	+0.2
3,266,832	-		PFLU_RS14615	0.70	-0.2
3,266,832	-		PFLU_RS14615	0.70	+0.6
3,267,040	+				+2.2
3,267,041	-				-0.4
3,267,041	-				-1.4
3,267,043	+				-0.4
3,267,043	+				+0.6
3,267,043	+				-1.2
3,267,043	+				+1.9
3,267,043	+				-0.7
3,267,043	+				+0.8
3,267,043	+				+0.5
3,267,044	-				+2.7
3,267,044	-				+2.7
3,267,044	-				+1.4
3,267,044	-				-1.0
3,267,044	-				-1.8
3,267,044	-				-1.3
3,267,044	-				-1.3
3,267,092	+				-0.4
3,267,092	+				+0.6
3,267,093	-				+0.7
3,267,123	+				-0.5
3,267,124	-				+0.6
3,267,154	+				-2.3
3,267,154	+				-0.8
3,267,154	+				-0.2
3,267,154	+				+0.3
3,267,154	+				-1.8
3,267,155	-				-0.2
3,267,155	-				-1.4