Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_66

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
105,092	+				-0.9
105,251	+				+0.4
105,252	-				-0.3
105,252	-				-1.6
105,283	+				+1.0
105,329	+		Pf6N2E2_65	0.14	-0.2
105,330	-		Pf6N2E2_65	0.14	+0.2
105,330	-		Pf6N2E2_65	0.14	-0.9
105,330	-		Pf6N2E2_65	0.14	-1.1
105,330	-		Pf6N2E2_65	0.14	+0.5
105,330	-		Pf6N2E2_65	0.14	+0.0
105,436	+		Pf6N2E2_65	0.28	-0.3
105,436	+		Pf6N2E2_65	0.28	+0.3
105,437	-		Pf6N2E2_65	0.28	+0.1
105,697	+		Pf6N2E2_65	0.62	-0.2
105,698	-		Pf6N2E2_65	0.62	+0.5
105,698	-		Pf6N2E2_65	0.62	-0.4
105,801	+		Pf6N2E2_65	0.76	+0.9
105,802	-		Pf6N2E2_65	0.76	-2.6
105,802	-		Pf6N2E2_65	0.76	+0.6
105,829	+		Pf6N2E2_65	0.79	-0.9
105,829	+		Pf6N2E2_65	0.79	-0.3
105,855	+		Pf6N2E2_65	0.83	+0.2
105,954	+				+0.1
105,955	-				-1.4
106,013	-				-1.2
106,013	-				-0.7
106,147	+				-2.8
106,147	+				-0.9
106,148	-				-2.2
106,148	-				-2.6
106,470	+		Pf6N2E2_66	0.38	-3.4
106,470	+		Pf6N2E2_66	0.38	-3.3
106,475	-		Pf6N2E2_66	0.39	+1.6
106,475	-		Pf6N2E2_66	0.39	-3.0
106,475	-		Pf6N2E2_66	0.39	+1.6
106,529	-		Pf6N2E2_66	0.44	+1.6
106,529	-		Pf6N2E2_66	0.44	+0.0
106,543	+		Pf6N2E2_66	0.45	-4.0
106,637	+		Pf6N2E2_66	0.54	-2.2
106,717	+		Pf6N2E2_66	0.61	-3.0
106,717	+		Pf6N2E2_66	0.61	-2.4
106,717	+		Pf6N2E2_66	0.61	-2.9
106,717	+		Pf6N2E2_66	0.61	-2.4
106,717	+		Pf6N2E2_66	0.61	-3.0
106,717	+		Pf6N2E2_66	0.61	-2.7
106,718	-		Pf6N2E2_66	0.61	-3.8
106,718	-		Pf6N2E2_66	0.61	-4.0
106,718	-		Pf6N2E2_66	0.61	+0.6
106,718	-		Pf6N2E2_66	0.61	-3.2
106,718	-		Pf6N2E2_66	0.61	-1.9
106,718	-		Pf6N2E2_66	0.61	+1.6
106,718	-		Pf6N2E2_66	0.61	+1.6
106,882	+		Pf6N2E2_66	0.76	-4.4
106,882	+		Pf6N2E2_66	0.76	-4.2
106,883	-		Pf6N2E2_66	0.77	+1.6
106,883	-		Pf6N2E2_66	0.77	-1.7
106,883	-		Pf6N2E2_66	0.77	-1.7
106,883	-		Pf6N2E2_66	0.77	-1.1
106,883	-		Pf6N2E2_66	0.77	-3.1
106,975	+		Pf6N2E2_66	0.85	-3.2
107,076	+				-2.3
107,111	+				+0.5
107,177	+				-2.2