Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5922

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
6,740,381	+				-0.1
6,740,382	-				-0.3
6,740,426	+				+0.2
6,740,582	+				+0.6
6,740,583	-				-0.1
6,740,583	-				-0.6
6,740,596	+				-0.0
6,740,596	+				-0.8
6,740,597	-				-0.1
6,740,597	-				+1.6
6,740,597	-				-1.2
6,740,679	-		Pf6N2E2_5921	0.18	+0.1
6,740,825	-		Pf6N2E2_5921	0.41	+0.3
6,740,825	-		Pf6N2E2_5921	0.41	+0.9
6,740,990	+		Pf6N2E2_5921	0.67	-0.6
6,740,990	+		Pf6N2E2_5921	0.67	-0.5
6,740,990	+		Pf6N2E2_5921	0.67	-0.0
6,740,991	-		Pf6N2E2_5921	0.67	+0.3
6,740,991	-		Pf6N2E2_5921	0.67	+0.6
6,741,025	+		Pf6N2E2_5921	0.73	-0.4
6,741,025	+		Pf6N2E2_5921	0.73	-0.5
6,741,025	+		Pf6N2E2_5921	0.73	+1.0
6,741,202	+				-0.0
6,741,229	+				-1.0
6,741,230	-				-0.1
6,741,231	+				-0.3
6,741,231	+				+0.6
6,741,231	+				-0.0
6,741,231	+				-0.0
6,741,231	+				-0.2
6,741,231	+				+0.1
6,741,231	+				+1.6
6,741,231	+				-1.1
6,741,231	+				-1.4
6,741,231	+				+1.0
6,741,231	+				-1.1
6,741,232	-				-1.0
6,741,232	-				-0.6
6,741,232	-				-0.4
6,741,232	-				-0.1
6,741,232	-				-0.7
6,741,232	-				+1.6
6,741,232	-				-0.6
6,741,300	-				-0.1
6,741,300	-				-0.7
6,741,411	+		Pf6N2E2_5922	0.13	-0.9
6,741,411	+		Pf6N2E2_5922	0.13	+0.4
6,741,597	-		Pf6N2E2_5922	0.31	+1.6
6,741,814	+		Pf6N2E2_5922	0.53	-0.1
6,741,815	-		Pf6N2E2_5922	0.53	-0.4
6,741,815	-		Pf6N2E2_5922	0.53	-0.4
6,741,831	+		Pf6N2E2_5922	0.55	-2.7
6,741,831	+		Pf6N2E2_5922	0.55	+0.2
6,741,832	-		Pf6N2E2_5922	0.55	-0.6
6,741,874	+		Pf6N2E2_5922	0.59	+0.2
6,741,875	-		Pf6N2E2_5922	0.59	-1.4
6,741,875	-		Pf6N2E2_5922	0.59	-1.2
6,742,025	-		Pf6N2E2_5922	0.74	-0.4
6,742,071	-		Pf6N2E2_5922	0.79	+0.6
6,742,071	-		Pf6N2E2_5922	0.79	-0.2
6,742,138	+		Pf6N2E2_5922	0.85	-1.1
6,742,333	+				-1.7
6,742,333	+				+1.3
6,742,333	+				-1.1
6,742,336	-				-1.0
6,742,336	-				-1.0
6,742,336	-				-0.6
6,742,522	+		Pf6N2E2_5923	0.33	-1.4
6,742,522	+		Pf6N2E2_5923	0.33	+0.5
6,742,522	+		Pf6N2E2_5923	0.33	-0.4
6,742,522	+		Pf6N2E2_5923	0.33	+0.2
6,742,522	+		Pf6N2E2_5923	0.33	-1.4
6,742,522	+		Pf6N2E2_5923	0.33	-0.5
6,742,523	-		Pf6N2E2_5923	0.34	+0.6
6,742,523	-		Pf6N2E2_5923	0.34	+0.2
6,742,523	-		Pf6N2E2_5923	0.34	-0.5
6,742,546	+		Pf6N2E2_5923	0.39	+0.2
6,742,547	-		Pf6N2E2_5923	0.39	-0.2
6,742,547	-		Pf6N2E2_5923	0.39	+1.6
6,742,627	+		Pf6N2E2_5923	0.59	-1.6
6,742,798	+				+0.3
6,742,798	+				-0.1
6,742,798	+				+0.2
6,742,798	+				-0.1
6,742,798	+				+0.6
6,742,799	-				-0.3
6,742,799	-				+0.5
6,742,829	+				-1.2
6,742,829	+				-0.1
6,742,829	+				-0.1
6,742,830	-				-0.6
6,742,830	-				-0.0
6,742,830	-				+0.6
6,742,830	-				+0.1
6,742,831	+				+0.0
6,742,831	+				+0.1
6,742,831	+				-2.3
6,742,832	-				-1.0
6,742,832	-				+0.4
6,742,855	-				+0.2
6,742,989	+				-2.1
6,742,989	+				-0.5
6,742,989	+				+0.8
6,742,990	-				+1.0
6,742,990	-				+0.5
6,743,051	-				-0.3