Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5819

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
6,636,063	+		Pf6N2E2_5818	0.17	-0.3
6,636,648	+				-1.1
6,636,648	+				-0.7
6,636,680	+				-0.0
6,636,681	-				-0.0
6,636,681	-				-0.7
6,636,701	-				-1.0
6,636,772	+				+1.6
6,636,974	-		Pf6N2E2_5819	0.18	+1.0
6,637,060	+		Pf6N2E2_5819	0.28	-0.7
6,637,060	+		Pf6N2E2_5819	0.28	+0.6
6,637,240	+		Pf6N2E2_5819	0.48	+0.4
6,637,240	+		Pf6N2E2_5819	0.48	+0.3
6,637,277	+		Pf6N2E2_5819	0.52	+0.6
6,637,278	-		Pf6N2E2_5819	0.52	-0.9
6,637,414	+		Pf6N2E2_5819	0.67	+0.6
6,637,414	+		Pf6N2E2_5819	0.67	-0.9
6,637,415	-		Pf6N2E2_5819	0.67	-1.4
6,637,415	-		Pf6N2E2_5819	0.67	+0.3
6,637,415	-		Pf6N2E2_5819	0.67	-0.2
6,637,454	-		Pf6N2E2_5819	0.71	-1.2
6,637,556	+		Pf6N2E2_5819	0.82	+0.1
6,637,556	+		Pf6N2E2_5819	0.82	+0.3
6,637,557	-		Pf6N2E2_5819	0.82	-0.1
6,638,189	+		Pf6N2E2_5820	0.37	+1.6
6,638,190	-		Pf6N2E2_5820	0.37	-1.5
6,638,190	-		Pf6N2E2_5820	0.37	-0.6
6,638,320	-		Pf6N2E2_5820	0.53	+0.6
6,638,516	+		Pf6N2E2_5820	0.78	+0.7
6,638,688	+				+0.2
6,638,688	+				-0.6