Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5593

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
6,409,491	+				+0.6
6,409,619	+				-2.7
6,409,619	+				-0.3
6,409,626	+				+0.6
6,409,627	-				+1.6
6,409,677	-				+0.1
6,409,691	+				-0.4
6,409,786	+				-1.4
6,409,812	+		Pf6N2E2_5592	0.12	-0.8
6,409,871	+		Pf6N2E2_5592	0.21	-0.3
6,410,034	+		Pf6N2E2_5592	0.47	+1.8
6,410,035	-		Pf6N2E2_5592	0.48	-0.7
6,410,035	-		Pf6N2E2_5592	0.48	-1.5
6,410,035	-		Pf6N2E2_5592	0.48	-0.6
6,410,038	+		Pf6N2E2_5592	0.48	-0.3
6,410,038	+		Pf6N2E2_5592	0.48	-0.7
6,410,038	+		Pf6N2E2_5592	0.48	+0.1
6,410,038	+		Pf6N2E2_5592	0.48	-0.3
6,410,038	+		Pf6N2E2_5592	0.48	-0.7
6,410,038	+		Pf6N2E2_5592	0.48	-0.4
6,410,038	+		Pf6N2E2_5592	0.48	-0.6
6,410,039	-		Pf6N2E2_5592	0.48	-0.3
6,410,039	-		Pf6N2E2_5592	0.48	+0.3
6,410,039	-		Pf6N2E2_5592	0.48	-0.0
6,410,039	-		Pf6N2E2_5592	0.48	-0.3
6,410,039	-		Pf6N2E2_5592	0.48	-0.1
6,410,057	+		Pf6N2E2_5592	0.51	-0.8
6,410,068	+		Pf6N2E2_5592	0.53	-0.2
6,410,068	+		Pf6N2E2_5592	0.53	-0.1
6,410,068	+		Pf6N2E2_5592	0.53	+0.4
6,410,069	-		Pf6N2E2_5592	0.53	+1.6
6,410,126	+		Pf6N2E2_5592	0.62	-0.3
6,410,276	+		Pf6N2E2_5592	0.86	+0.6
6,410,280	+		Pf6N2E2_5592	0.87	+0.6
6,410,280	+		Pf6N2E2_5592	0.87	-0.8
6,410,280	+		Pf6N2E2_5592	0.87	-0.1
6,410,281	-		Pf6N2E2_5592	0.87	+1.6
6,410,380	+				-0.3
6,410,380	+				-0.9
6,410,387	+				-0.9
6,410,413	+				-2.5
6,410,572	+		Pf6N2E2_5593	0.84	+1.6
6,410,572	+		Pf6N2E2_5593	0.84	-1.0
6,410,572	+		Pf6N2E2_5593	0.84	-0.5
6,410,573	-		Pf6N2E2_5593	0.84	-0.6
6,410,573	-		Pf6N2E2_5593	0.84	-1.7
6,410,573	-		Pf6N2E2_5593	0.84	+1.6
6,410,573	-		Pf6N2E2_5593	0.84	-1.9
6,410,573	-		Pf6N2E2_5593	0.84	-3.2
6,410,618	+				-2.5
6,410,619	-				+0.6
6,410,640	+				-1.6
6,410,640	+				+0.3
6,410,640	+				-1.9
6,410,640	+				-0.4
6,410,641	-				-0.6
6,410,641	-				-0.9
6,410,641	-				+0.2
6,410,641	-				+0.8
6,410,641	-				+1.6
6,410,641	-				+0.4
6,410,641	-				-1.2
6,410,641	-				-0.2
6,410,641	-				-2.3
6,410,735	-				+1.9
6,410,742	+				-0.2
6,410,743	-				-0.3
6,411,124	+		Pf6N2E2_5594	0.65	+0.6
6,411,124	+		Pf6N2E2_5594	0.65	+1.3
6,411,124	+		Pf6N2E2_5594	0.65	-0.6
6,411,154	+		Pf6N2E2_5594	0.70	+0.7
6,411,154	+		Pf6N2E2_5594	0.70	+1.0
6,411,154	+		Pf6N2E2_5594	0.70	-0.2
6,411,154	+		Pf6N2E2_5594	0.70	-0.5
6,411,155	-		Pf6N2E2_5594	0.70	-1.9
6,411,155	-		Pf6N2E2_5594	0.70	-0.9
6,411,171	-		Pf6N2E2_5594	0.72	-0.7
6,411,171	-		Pf6N2E2_5594	0.72	-0.7
6,411,171	-		Pf6N2E2_5594	0.72	-0.2
6,411,272	-		Pf6N2E2_5594	0.88	-0.8
6,411,321	+				+0.8