Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4657

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
5,386,789	-		Pf6N2E2_4656	0.21	-0.1
5,387,623	+				+0.6
5,388,957	-		Pf6N2E2_4658	0.50	-0.2
5,389,028	+		Pf6N2E2_4658	0.81	+0.7
5,389,028	+		Pf6N2E2_4658	0.81	-0.9
5,389,028	+		Pf6N2E2_4658	0.81	-0.1
5,389,028	+		Pf6N2E2_4658	0.81	-1.0
5,389,028	+		Pf6N2E2_4658	0.81	-0.8
5,389,028	+		Pf6N2E2_4658	0.81	-0.5
5,389,028	+		Pf6N2E2_4658	0.81	-0.1
5,389,029	-		Pf6N2E2_4658	0.82	-1.2
5,389,029	-		Pf6N2E2_4658	0.82	+0.7
5,389,083	+				+1.2
5,389,083	+				+0.2
5,389,084	-				-1.5
5,389,084	-				-0.2
5,389,084	-				+0.5
5,389,084	-				-1.0
5,389,157	+				+2.8
5,389,157	+				-0.1
5,389,157	+				-0.0
5,389,190	+		Pf6N2E2_4659	0.19	-0.5
5,389,191	-		Pf6N2E2_4659	0.20	+0.8
5,389,357	+		Pf6N2E2_4659	0.69	+0.5
5,389,408	+		Pf6N2E2_4659	0.85	-0.2
5,389,408	+		Pf6N2E2_4659	0.85	-1.2
5,389,408	+		Pf6N2E2_4659	0.85	+1.2
5,389,408	+		Pf6N2E2_4659	0.85	-0.9
5,389,408	+		Pf6N2E2_4659	0.85	+0.2
5,389,408	+		Pf6N2E2_4659	0.85	+0.3
5,389,408	+		Pf6N2E2_4659	0.85	+0.2
5,389,490	+				+0.7
5,389,492	+				+3.0