Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4300

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
5,013,672	+		Pf6N2E2_4299	0.33	+0.3
5,013,672	+		Pf6N2E2_4299	0.33	-1.0
5,013,673	-		Pf6N2E2_4299	0.33	-0.2
5,013,673	-		Pf6N2E2_4299	0.33	-0.6
5,013,673	-		Pf6N2E2_4299	0.33	+1.0
5,013,673	-		Pf6N2E2_4299	0.33	+3.0
5,013,673	-		Pf6N2E2_4299	0.33	+0.2
5,013,673	-		Pf6N2E2_4299	0.33	-0.2
5,013,673	-		Pf6N2E2_4299	0.33	-0.5
5,013,673	-		Pf6N2E2_4299	0.33	-0.1
5,013,714	+		Pf6N2E2_4299	0.36	+1.2
5,013,715	-		Pf6N2E2_4299	0.36	+0.6
5,013,715	-		Pf6N2E2_4299	0.36	-0.4
5,013,715	-		Pf6N2E2_4299	0.36	-0.3
5,013,715	-		Pf6N2E2_4299	0.36	-0.2
5,013,715	-		Pf6N2E2_4299	0.36	+0.6
5,013,795	-		Pf6N2E2_4299	0.41	-0.7
5,013,888	+		Pf6N2E2_4299	0.47	+1.3
5,013,888	+		Pf6N2E2_4299	0.47	+0.2
5,013,966	+		Pf6N2E2_4299	0.53	-0.0
5,013,986	+		Pf6N2E2_4299	0.54	-0.2
5,013,999	+		Pf6N2E2_4299	0.55	-0.5
5,014,000	-		Pf6N2E2_4299	0.55	-1.4
5,014,000	-		Pf6N2E2_4299	0.55	-0.8
5,014,000	-		Pf6N2E2_4299	0.55	+0.3
5,014,020	+		Pf6N2E2_4299	0.56	-0.5
5,014,020	+		Pf6N2E2_4299	0.56	-0.6
5,014,020	+		Pf6N2E2_4299	0.56	+0.3
5,014,021	-		Pf6N2E2_4299	0.56	-0.4
5,014,194	+		Pf6N2E2_4299	0.68	+1.4
5,014,195	-		Pf6N2E2_4299	0.68	+1.4
5,014,241	+		Pf6N2E2_4299	0.71	-0.2
5,014,242	-		Pf6N2E2_4299	0.71	+0.1
5,014,313	+		Pf6N2E2_4299	0.76	+0.4
5,014,332	+		Pf6N2E2_4299	0.77	+0.2
5,014,332	+		Pf6N2E2_4299	0.77	-1.9
5,014,333	-		Pf6N2E2_4299	0.78	+0.2
5,014,333	-		Pf6N2E2_4299	0.78	+0.3
5,014,333	-		Pf6N2E2_4299	0.78	-0.4
5,014,333	-		Pf6N2E2_4299	0.78	-0.2
5,014,333	-		Pf6N2E2_4299	0.78	-0.2
5,014,356	+		Pf6N2E2_4299	0.79	-1.2
5,014,356	+		Pf6N2E2_4299	0.79	-0.9
5,014,357	-		Pf6N2E2_4299	0.79	+0.3
5,014,357	-		Pf6N2E2_4299	0.79	+0.4
5,014,386	+		Pf6N2E2_4299	0.81	+0.5
5,014,386	+		Pf6N2E2_4299	0.81	+0.1
5,014,386	+		Pf6N2E2_4299	0.81	-0.7
5,014,387	-		Pf6N2E2_4299	0.81	-1.4
5,014,400	-		Pf6N2E2_4299	0.82	+1.4
5,014,458	-		Pf6N2E2_4299	0.86	+0.2
5,014,458	-		Pf6N2E2_4299	0.86	-0.2
5,014,474	-		Pf6N2E2_4299	0.87	-0.5
5,014,582	+				+0.4
5,014,594	+				-1.6
5,014,611	+				-0.7
5,014,611	+				-1.3
5,014,611	+				-0.3
5,014,611	+				-1.0
5,014,612	-				+0.5
5,014,612	-				-0.6
5,014,612	-				-0.5
5,014,662	+				-1.2
5,014,662	+				-0.9
5,014,663	-				-0.1
5,014,678	+				+1.4
5,014,678	+				+1.4
5,014,678	+				-3.0
5,014,678	+				+0.1
5,014,678	+				+0.2
5,014,678	+				-0.6
5,014,679	-				+1.1
5,014,679	-				+1.4
5,014,679	-				-0.6
5,014,679	-				-0.2
5,014,679	-				-0.5
5,014,679	-				+0.6
5,014,679	-				+1.4
5,014,679	-				+0.0
5,014,712	+				-0.2
5,014,713	-		Pf6N2E2_4300	0.10	-0.9
5,014,713	-		Pf6N2E2_4300	0.10	-0.5
5,014,717	-		Pf6N2E2_4300	0.11	-1.4
5,014,840	-		Pf6N2E2_4300	0.41	-2.7
5,014,840	-		Pf6N2E2_4300	0.41	+1.4
5,014,840	-		Pf6N2E2_4300	0.41	+1.4
5,015,086	+				+0.2
5,015,086	+				-0.3
5,015,086	+				+1.4
5,015,086	+				+0.2
5,015,086	+				-0.2
5,015,086	+				-0.3
5,015,086	+				-1.2
5,015,086	+				-0.1
5,015,086	+				-0.4
5,015,086	+				-0.1
5,015,086	+				-0.9
5,015,086	+				-0.5
5,015,086	+				-1.0
5,015,086	+				-0.6
5,015,086	+				+0.1
5,015,086	+				-0.5
5,015,086	+				-0.0
5,015,086	+				-0.6
5,015,086	+				-1.1
5,015,086	+				+0.3
5,015,086	+				-0.5
5,015,086	+				+0.4
5,015,086	+				-0.0
5,015,086	+				+0.6
5,015,086	+				-0.2
5,015,086	+				-0.2
5,015,086	+				-0.2
5,015,086	+				-0.2
5,015,086	+				-0.9
5,015,087	-				+0.4
5,015,087	-				-0.6
5,015,087	-				+0.4
5,015,087	-				+1.4
5,015,087	-				-0.2
5,015,087	-				-0.2
5,015,087	-				+0.4
5,015,087	-				+0.1
5,015,087	-				-1.5
5,015,087	-				+0.5
5,015,087	-				+0.2
5,015,087	-				+0.6
5,015,087	-				+0.3
5,015,087	-				+0.2
5,015,087	-				-0.7
5,015,087	-				-0.4
5,015,087	-				-0.7
5,015,087	-				-0.4
5,015,087	-				-1.7
5,015,087	-				-1.5
5,015,087	-				-0.6
5,015,087	-				+0.8
5,015,087	-				+0.1
5,015,087	-				-1.2
5,015,087	-				-0.5
5,015,087	-				-0.1
5,015,087	-				+0.6
5,015,087	-				-0.8
5,015,087	-				+0.3
5,015,087	-				-1.0
5,015,104	+				-0.3
5,015,104	+				+0.1
5,015,105	-				+0.6
5,015,105	-				-0.0
5,015,108	-				+0.2
5,015,108	-				+0.3
5,015,161	-				+1.1
5,015,320	+		Pf6N2E2_4301	0.13	+0.3
5,015,320	+		Pf6N2E2_4301	0.13	+0.1
5,015,320	+		Pf6N2E2_4301	0.13	-2.6
5,015,366	+		Pf6N2E2_4301	0.15	+0.4
5,015,403	+		Pf6N2E2_4301	0.18	+0.6
5,015,403	+		Pf6N2E2_4301	0.18	+1.4
5,015,403	+		Pf6N2E2_4301	0.18	-0.3
5,015,404	-		Pf6N2E2_4301	0.18	+0.7
5,015,404	-		Pf6N2E2_4301	0.18	-0.4
5,015,426	+		Pf6N2E2_4301	0.19	-1.6
5,015,426	+		Pf6N2E2_4301	0.19	-0.2
5,015,426	+		Pf6N2E2_4301	0.19	-0.8
5,015,426	+		Pf6N2E2_4301	0.19	+0.0
5,015,458	+		Pf6N2E2_4301	0.21	+1.6
5,015,500	+		Pf6N2E2_4301	0.23	-0.2
5,015,500	+		Pf6N2E2_4301	0.23	+0.1
5,015,614	+		Pf6N2E2_4301	0.29	+0.2
5,015,615	-		Pf6N2E2_4301	0.29	-1.4
5,015,615	-		Pf6N2E2_4301	0.29	-0.2
5,015,632	+		Pf6N2E2_4301	0.30	+0.4
5,015,633	-		Pf6N2E2_4301	0.30	+0.1
5,015,633	-		Pf6N2E2_4301	0.30	-0.1
5,015,721	+		Pf6N2E2_4301	0.35	+1.4
5,015,722	-		Pf6N2E2_4301	0.35	+0.4
5,015,722	-		Pf6N2E2_4301	0.35	+0.0
5,015,722	-		Pf6N2E2_4301	0.35	+0.1
5,015,802	+		Pf6N2E2_4301	0.40	-0.5
5,015,803	-		Pf6N2E2_4301	0.40	-1.0
5,015,833	+		Pf6N2E2_4301	0.42	+0.0
5,015,834	-		Pf6N2E2_4301	0.42	+0.4
5,015,834	-		Pf6N2E2_4301	0.42	+0.2
5,015,834	-		Pf6N2E2_4301	0.42	+1.0
5,015,993	+		Pf6N2E2_4301	0.51	+0.7
5,015,993	+		Pf6N2E2_4301	0.51	-1.4
5,015,994	-		Pf6N2E2_4301	0.51	-0.5
5,015,994	-		Pf6N2E2_4301	0.51	+0.7
5,016,073	+		Pf6N2E2_4301	0.55	+1.0
5,016,073	+		Pf6N2E2_4301	0.55	-1.5
5,016,073	+		Pf6N2E2_4301	0.55	+0.8
5,016,073	+		Pf6N2E2_4301	0.55	-0.6
5,016,073	+		Pf6N2E2_4301	0.55	-0.1
5,016,073	+		Pf6N2E2_4301	0.55	+1.0