Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3938

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,573,951	+				-0.1
4,573,951	+				+0.0
4,573,952	-				+0.7
4,573,952	-				-0.7
4,573,952	-				+0.4
4,573,952	-				-0.3
4,573,952	-				+0.6
4,573,952	-				+0.8
4,573,974	+				-0.6
4,573,974	+				-1.1
4,573,974	+				-0.5
4,573,974	+				+0.5
4,573,975	-				+1.5
4,573,975	-				+0.1
4,573,975	-				-0.7
4,573,975	-				-1.3
4,573,975	-				-1.1
4,573,975	-				+1.5
4,573,975	-				-1.8
4,573,975	-				-0.4
4,573,975	-				+0.5
4,573,975	-				-0.8
4,573,975	-				+0.9
4,573,975	-				-1.5
4,573,978	+				-0.4
4,573,978	+				-1.2
4,573,979	-				+1.5
4,573,979	-				-0.1
4,573,979	-				-0.6
4,573,979	-				-0.1
4,574,840	-				+0.3
4,574,856	-				-0.7
4,574,856	-				-0.7
4,574,856	-				+0.2
4,574,856	-				-0.2
4,574,856	-				-0.8
4,574,858	-				+0.4
4,574,858	-				+0.5
4,574,897	-				+0.1
4,574,897	-				-0.1
4,574,963	+				-0.3
4,574,963	+				-2.6
4,574,963	+				-1.3
4,574,964	-				-1.9
4,574,964	-				-1.4
4,574,964	-				-1.1
4,574,993	+				+1.5
4,575,116	+		Pf6N2E2_3938	0.11	-0.7
4,575,116	+		Pf6N2E2_3938	0.11	-2.0
4,575,116	+		Pf6N2E2_3938	0.11	+1.5
4,575,116	+		Pf6N2E2_3938	0.11	-1.2
4,575,116	+		Pf6N2E2_3938	0.11	-0.5
4,575,117	-		Pf6N2E2_3938	0.11	-0.7
4,575,117	-		Pf6N2E2_3938	0.11	+0.5
4,575,117	-		Pf6N2E2_3938	0.11	-1.8
4,575,117	-		Pf6N2E2_3938	0.11	-1.4
4,575,216	+		Pf6N2E2_3938	0.17	-0.9
4,575,217	-		Pf6N2E2_3938	0.18	-1.3
4,575,217	-		Pf6N2E2_3938	0.18	-0.9
4,575,217	-		Pf6N2E2_3938	0.18	-0.4
4,575,338	+		Pf6N2E2_3938	0.26	-0.5
4,575,339	-		Pf6N2E2_3938	0.26	-1.6
4,575,368	+		Pf6N2E2_3938	0.28	-0.2
4,575,368	+		Pf6N2E2_3938	0.28	-2.3
4,575,369	-		Pf6N2E2_3938	0.28	-1.8
4,575,369	-		Pf6N2E2_3938	0.28	-0.9
4,575,374	+		Pf6N2E2_3938	0.28	-2.3
4,575,374	+		Pf6N2E2_3938	0.28	-1.3
4,575,374	+		Pf6N2E2_3938	0.28	+0.5
4,575,374	+		Pf6N2E2_3938	0.28	+0.5
4,575,374	+		Pf6N2E2_3938	0.28	-0.9
4,575,374	+		Pf6N2E2_3938	0.28	-1.2
4,575,374	+		Pf6N2E2_3938	0.28	-0.9
4,575,375	-		Pf6N2E2_3938	0.28	-0.5
4,575,375	-		Pf6N2E2_3938	0.28	-0.9
4,575,375	-		Pf6N2E2_3938	0.28	-1.7
4,575,375	-		Pf6N2E2_3938	0.28	-0.1
4,575,375	-		Pf6N2E2_3938	0.28	-1.0
4,575,386	+		Pf6N2E2_3938	0.29	-1.7
4,575,516	-		Pf6N2E2_3938	0.37	-0.9
4,575,524	+		Pf6N2E2_3938	0.38	-0.6
4,575,525	-		Pf6N2E2_3938	0.38	-1.7
4,575,609	+		Pf6N2E2_3938	0.43	-1.2
4,575,692	+		Pf6N2E2_3938	0.49	-2.0
4,575,692	+		Pf6N2E2_3938	0.49	-0.9
4,575,692	+		Pf6N2E2_3938	0.49	-1.5
4,575,692	+		Pf6N2E2_3938	0.49	-1.2
4,575,692	+		Pf6N2E2_3938	0.49	+1.9
4,575,692	+		Pf6N2E2_3938	0.49	+1.5
4,575,692	+		Pf6N2E2_3938	0.49	-0.9
4,575,692	+		Pf6N2E2_3938	0.49	+0.3
4,575,692	+		Pf6N2E2_3938	0.49	-0.3
4,575,692	+		Pf6N2E2_3938	0.49	-1.4
4,575,693	-		Pf6N2E2_3938	0.49	-0.9
4,575,693	-		Pf6N2E2_3938	0.49	-1.1
4,575,693	-		Pf6N2E2_3938	0.49	-2.2
4,575,693	-		Pf6N2E2_3938	0.49	-2.0
4,575,693	-		Pf6N2E2_3938	0.49	-0.5
4,575,749	-		Pf6N2E2_3938	0.53	-1.3
4,575,749	-		Pf6N2E2_3938	0.53	-1.3
4,575,815	+		Pf6N2E2_3938	0.57	+0.1
4,576,025	+		Pf6N2E2_3938	0.71	-1.6
4,576,026	-		Pf6N2E2_3938	0.71	-2.6
4,576,032	-		Pf6N2E2_3938	0.71	-2.3
4,576,032	-		Pf6N2E2_3938	0.71	-1.1
4,576,032	-		Pf6N2E2_3938	0.71	-0.3
4,576,435	+				+0.2
4,576,445	+				-0.4
4,576,445	+				-0.7
4,576,574	+				-0.4
4,576,574	+				-0.2
4,576,574	+				+1.5
4,576,574	+				-0.9
4,576,574	+				-1.0
4,576,574	+				+0.2
4,576,575	-				-0.9
4,576,575	-				-0.6
4,576,575	-				+0.4
4,576,575	-				+0.3
4,576,575	-				+0.9
4,576,575	-				+0.1
4,576,575	-				-0.1
4,576,596	-				-0.8
4,576,877	+		Pf6N2E2_3939	0.63	+0.6
4,576,877	+		Pf6N2E2_3939	0.63	+0.4
4,576,877	+		Pf6N2E2_3939	0.63	-0.1
4,576,877	+		Pf6N2E2_3939	0.63	-1.0
4,576,878	-		Pf6N2E2_3939	0.63	+0.1
4,576,878	-		Pf6N2E2_3939	0.63	-0.5
4,576,879	+		Pf6N2E2_3939	0.63	-2.6
4,576,879	+		Pf6N2E2_3939	0.63	+0.4
4,576,879	+		Pf6N2E2_3939	0.63	+0.6
4,576,879	+		Pf6N2E2_3939	0.63	-0.5
4,576,879	+		Pf6N2E2_3939	0.63	-0.1
4,576,880	-		Pf6N2E2_3939	0.63	-0.5
4,576,880	-		Pf6N2E2_3939	0.63	+0.1
4,576,880	-		Pf6N2E2_3939	0.63	+1.1
4,576,880	-		Pf6N2E2_3939	0.63	+1.1
4,576,880	-		Pf6N2E2_3939	0.63	-0.8
4,576,961	-		Pf6N2E2_3939	0.82	-0.9
4,576,961	-		Pf6N2E2_3939	0.82	+1.1
4,577,065	+				-0.6
4,577,201	-		Pf6N2E2_3940	0.19	-3.5
4,577,201	-		Pf6N2E2_3940	0.19	-2.8
4,577,206	+		Pf6N2E2_3940	0.20	-2.9
4,577,206	+		Pf6N2E2_3940	0.20	-3.6
4,577,206	+		Pf6N2E2_3940	0.20	-2.8
4,577,207	-		Pf6N2E2_3940	0.20	+0.5
4,577,207	-		Pf6N2E2_3940	0.20	-2.2
4,577,207	-		Pf6N2E2_3940	0.20	+0.1
4,577,207	-		Pf6N2E2_3940	0.20	+0.5
4,577,306	-		Pf6N2E2_3940	0.35	-1.5