Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3533

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
4,122,551	-				-2.6
4,122,583	+				-0.1
4,122,583	+				+0.3
4,122,583	+				+1.5
4,122,584	-				+1.5
4,122,757	-				-0.7
4,122,828	+		Pf6N2E2_3532	0.16	-0.1
4,123,063	-		Pf6N2E2_3532	0.48	+0.3
4,123,089	+		Pf6N2E2_3532	0.51	+0.5
4,123,089	+		Pf6N2E2_3532	0.51	+0.8
4,123,089	+		Pf6N2E2_3532	0.51	+1.3
4,123,089	+		Pf6N2E2_3532	0.51	-0.1
4,123,089	+		Pf6N2E2_3532	0.51	+2.5
4,123,089	+		Pf6N2E2_3532	0.51	-0.3
4,123,089	+		Pf6N2E2_3532	0.51	+0.5
4,123,090	-		Pf6N2E2_3532	0.51	+0.2
4,123,090	-		Pf6N2E2_3532	0.51	+1.5
4,123,090	-		Pf6N2E2_3532	0.51	+1.5
4,123,095	+		Pf6N2E2_3532	0.52	+0.5
4,123,095	+		Pf6N2E2_3532	0.52	-0.2
4,123,096	-		Pf6N2E2_3532	0.52	+1.5
4,123,096	-		Pf6N2E2_3532	0.52	+1.5
4,123,096	-		Pf6N2E2_3532	0.52	-1.3
4,123,096	-		Pf6N2E2_3532	0.52	+2.5
4,123,096	-		Pf6N2E2_3532	0.52	+1.5
4,123,096	-		Pf6N2E2_3532	0.52	+0.3
4,123,096	-		Pf6N2E2_3532	0.52	+1.5
4,123,212	+		Pf6N2E2_3532	0.68	-1.7
4,123,213	-		Pf6N2E2_3532	0.68	+1.0
4,123,252	-		Pf6N2E2_3532	0.73	+0.5
4,123,339	-		Pf6N2E2_3532	0.85	-1.3
4,123,339	-		Pf6N2E2_3532	0.85	-0.3
4,123,646	+		Pf6N2E2_3533	0.32	-1.9
4,123,646	+		Pf6N2E2_3533	0.32	+2.5
4,123,646	+		Pf6N2E2_3533	0.32	-1.1
4,123,647	-		Pf6N2E2_3533	0.32	-0.2
4,123,647	-		Pf6N2E2_3533	0.32	+1.5
4,123,647	-		Pf6N2E2_3533	0.32	+1.5
4,123,647	-		Pf6N2E2_3533	0.32	-0.5
4,123,647	-		Pf6N2E2_3533	0.32	+0.5
4,124,060	+				-1.3
4,124,060	+				-0.1
4,124,060	+				+0.6
4,124,060	+				+0.5
4,124,060	+				+0.0
4,124,060	+				-0.1
4,124,060	+				+2.5
4,124,061	-				+0.5
4,124,061	-				-0.2
4,124,061	-				+1.5
4,124,061	-				-1.5
4,124,119	+				-0.1
4,124,119	+				+1.5
4,124,119	+				-0.5
4,124,120	-				-0.4
4,124,120	-				-0.8
4,124,120	-				-2.5
4,124,120	-				-2.1
4,124,120	-				-2.7
4,124,123	+				+0.1
4,124,123	+				+1.5
4,124,124	-				-0.6
4,124,124	-				-1.3
4,124,124	-				-0.1
4,124,175	+				+1.5
4,124,175	+				+1.5
4,124,494	+		Pf6N2E2_3534	0.34	+1.5
4,124,494	+		Pf6N2E2_3534	0.34	-0.2
4,124,495	-		Pf6N2E2_3534	0.34	+0.5
4,124,495	-		Pf6N2E2_3534	0.34	-1.5
4,125,035	-		Pf6N2E2_3534	0.77	-2.3