Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3276

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
3,778,064	+		Pf6N2E2_3274	0.15	-0.6
3,778,064	+		Pf6N2E2_3274	0.15	+2.0
3,778,065	-		Pf6N2E2_3274	0.15	+1.0
3,778,073	+		Pf6N2E2_3274	0.16	-0.5
3,778,074	-		Pf6N2E2_3274	0.17	-0.0
3,778,074	-		Pf6N2E2_3274	0.17	-1.6
3,778,074	-		Pf6N2E2_3274	0.17	-0.0
3,778,074	-		Pf6N2E2_3274	0.17	-0.3
3,778,076	+		Pf6N2E2_3274	0.17	-0.6
3,778,076	+		Pf6N2E2_3274	0.17	-1.3
3,778,077	-		Pf6N2E2_3274	0.17	-1.3
3,778,077	-		Pf6N2E2_3274	0.17	-0.2
3,778,113	+		Pf6N2E2_3274	0.23	+0.0
3,778,481	+		Pf6N2E2_3274	0.83	-0.0
3,778,481	+		Pf6N2E2_3274	0.83	-0.8
3,778,481	+		Pf6N2E2_3274	0.83	-0.1
3,778,482	-		Pf6N2E2_3274	0.83	+0.1
3,778,482	-		Pf6N2E2_3274	0.83	-0.5
3,778,482	-		Pf6N2E2_3274	0.83	-0.0
3,778,482	-		Pf6N2E2_3274	0.83	+0.3
3,778,482	-		Pf6N2E2_3274	0.83	+0.2
3,778,502	+		Pf6N2E2_3274	0.86	-0.4
3,778,550	+				-0.5
3,778,551	-				-1.0
3,778,575	+				-0.6
3,778,575	+				-0.6
3,778,575	+				+0.7
3,778,670	-		Pf6N2E2_3275	0.19	+0.5
3,778,708	+		Pf6N2E2_3275	0.27	+0.2
3,778,708	+		Pf6N2E2_3275	0.27	-0.2
3,778,708	+		Pf6N2E2_3275	0.27	-0.6
3,778,708	+		Pf6N2E2_3275	0.27	-1.3
3,778,708	+		Pf6N2E2_3275	0.27	-0.1
3,778,708	+		Pf6N2E2_3275	0.27	+0.1
3,778,708	+		Pf6N2E2_3275	0.27	-1.3
3,778,709	-		Pf6N2E2_3275	0.28	-0.3
3,778,709	-		Pf6N2E2_3275	0.28	+0.5
3,778,709	-		Pf6N2E2_3275	0.28	-0.4
3,778,709	-		Pf6N2E2_3275	0.28	+2.5
3,778,948	+		Pf6N2E2_3275	0.82	+0.2
3,778,949	-		Pf6N2E2_3275	0.82	-0.2
3,778,965	+		Pf6N2E2_3275	0.86	+1.1
3,778,966	-		Pf6N2E2_3275	0.86	+0.1
3,779,009	+				-0.8
3,779,009	+				-1.3
3,779,009	+				-0.5
3,779,010	-				+0.1
3,779,010	-				+0.7
3,779,166	-				+0.1
3,779,950	+		Pf6N2E2_3276	0.65	-0.5
3,779,950	+		Pf6N2E2_3276	0.65	+0.0
3,779,950	+		Pf6N2E2_3276	0.65	+0.1
3,779,951	-		Pf6N2E2_3276	0.65	-1.5
3,779,951	-		Pf6N2E2_3276	0.65	-0.6
3,780,194	-		Pf6N2E2_3276	0.83	+0.5
3,780,253	+		Pf6N2E2_3276	0.87	+1.2
3,780,254	-		Pf6N2E2_3276	0.87	-0.8
3,780,254	-		Pf6N2E2_3276	0.87	-0.2
3,780,254	-		Pf6N2E2_3276	0.87	-0.6
3,780,315	+				-0.1
3,780,315	+				-0.1
3,780,316	-				-0.0
3,780,316	-				+0.9
3,780,316	-				-0.4
3,780,424	-				+0.2
3,780,424	-				-0.8
3,780,424	-				-1.5
3,780,426	+				+1.5
3,780,426	+				+0.8
3,780,426	+				-0.2
3,780,426	+				-0.3
3,780,427	-				+0.9
3,780,427	-				+0.9
3,780,427	-				-1.5
3,780,427	-				-0.8
3,780,427	-				-1.3
3,780,457	+				-0.5
3,780,458	-				+0.4
3,780,458	-				+0.5
3,780,458	-				-0.3
3,780,714	+		Pf6N2E2_3277	0.73	-0.5
3,780,714	+		Pf6N2E2_3277	0.73	-0.4
3,780,715	-		Pf6N2E2_3277	0.73	-0.4
3,780,792	+				-1.5
3,780,792	+				-0.2
3,780,793	-				-0.0
3,780,793	-				+0.5
3,780,793	-				+0.1
3,780,950	+				-0.3
3,781,189	+				-0.5
3,781,216	-				-0.5
3,781,295	+		Pf6N2E2_3278	0.14	-0.6
3,781,296	-		Pf6N2E2_3278	0.14	-0.6
3,781,296	-		Pf6N2E2_3278	0.14	+1.5
3,781,410	+		Pf6N2E2_3278	0.22	-0.7
3,781,411	-		Pf6N2E2_3278	0.23	-0.1