Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2569

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
3,025,500	+		Pf6N2E2_2567	0.85	-0.6
3,025,501	-		Pf6N2E2_2567	0.85	-0.9
3,025,501	-		Pf6N2E2_2567	0.85	-0.6
3,025,501	-		Pf6N2E2_2567	0.85	-1.4
3,025,531	-		Pf6N2E2_2567	0.88	-1.1
3,025,531	-		Pf6N2E2_2567	0.88	+1.6
3,025,531	-		Pf6N2E2_2567	0.88	-1.0
3,025,561	+				-0.4
3,025,561	+				-2.0
3,025,575	+				-1.4
3,025,818	+		Pf6N2E2_2568	0.23	-0.6
3,025,818	+		Pf6N2E2_2568	0.23	+1.6
3,025,819	-		Pf6N2E2_2568	0.23	-1.0
3,025,819	-		Pf6N2E2_2568	0.23	-1.2
3,025,819	-		Pf6N2E2_2568	0.23	-0.6
3,025,819	-		Pf6N2E2_2568	0.23	-1.4
3,025,819	-		Pf6N2E2_2568	0.23	-0.6
3,025,819	-		Pf6N2E2_2568	0.23	-0.5
3,025,886	+		Pf6N2E2_2568	0.32	+0.1
3,025,886	+		Pf6N2E2_2568	0.32	-0.3
3,025,887	-		Pf6N2E2_2568	0.32	-1.5
3,025,887	-		Pf6N2E2_2568	0.32	-1.0
3,025,992	+		Pf6N2E2_2568	0.46	-2.6
3,026,070	+		Pf6N2E2_2568	0.57	-1.4
3,026,108	+		Pf6N2E2_2568	0.62	-1.2
3,026,108	+		Pf6N2E2_2568	0.62	-1.8
3,026,109	-		Pf6N2E2_2568	0.62	-0.1
3,026,328	+				+0.0
3,026,329	-				-0.8
3,026,329	-				+0.0
3,026,415	+				-1.9
3,026,415	+				+1.6
3,026,484	-				+0.0
3,026,484	-				-2.0
3,026,484	-				+0.6
3,026,484	-				-2.2
3,026,607	-		Pf6N2E2_2569	0.19	-1.8
3,026,631	+		Pf6N2E2_2569	0.21	-1.2
3,026,631	+		Pf6N2E2_2569	0.21	-1.7
3,026,631	+		Pf6N2E2_2569	0.21	-0.7
3,026,631	+		Pf6N2E2_2569	0.21	-0.0
3,026,631	+		Pf6N2E2_2569	0.21	-1.3
3,026,632	-		Pf6N2E2_2569	0.21	-0.9
3,026,632	-		Pf6N2E2_2569	0.21	-1.4
3,026,632	-		Pf6N2E2_2569	0.21	-1.0
3,026,632	-		Pf6N2E2_2569	0.21	-1.0
3,026,651	+		Pf6N2E2_2569	0.23	-0.4
3,026,651	+		Pf6N2E2_2569	0.23	-0.7
3,026,651	+		Pf6N2E2_2569	0.23	-3.3
3,026,651	+		Pf6N2E2_2569	0.23	-0.9
3,026,651	+		Pf6N2E2_2569	0.23	-2.8
3,026,652	-		Pf6N2E2_2569	0.23	+0.5
3,026,926	-		Pf6N2E2_2569	0.47	-0.8
3,026,945	+		Pf6N2E2_2569	0.49	-0.4
3,027,107	+		Pf6N2E2_2569	0.63	-2.2
3,027,107	+		Pf6N2E2_2569	0.63	+1.6
3,027,290	-		Pf6N2E2_2569	0.79	+0.2
3,027,315	+		Pf6N2E2_2569	0.82	-0.6
3,027,315	+		Pf6N2E2_2569	0.82	-0.7
3,027,316	-		Pf6N2E2_2569	0.82	-1.5
3,027,316	-		Pf6N2E2_2569	0.82	-1.8
3,027,316	-		Pf6N2E2_2569	0.82	-0.8
3,027,356	+		Pf6N2E2_2569	0.85	-0.1
3,027,356	+		Pf6N2E2_2569	0.85	-1.0
3,027,356	+		Pf6N2E2_2569	0.85	-1.1
3,027,356	+		Pf6N2E2_2569	0.85	-1.8
3,027,441	+				+0.2
3,027,442	-				-0.6
3,027,442	-				-1.5
3,027,442	-				+0.1
3,027,442	-				-1.5
3,027,513	+				-1.0
3,027,513	+				-1.9
3,027,513	+				+0.6
3,027,513	+				-1.2
3,027,513	+				-0.7
3,027,514	-				-0.8
3,027,514	-				-1.4
3,027,514	-				-1.0
3,027,517	+				-0.5
3,027,517	+				+1.6
3,027,518	-				+0.6
3,027,518	-				-1.2
3,027,518	-				-2.0
3,027,522	+				-0.9
3,027,523	-				-1.0
3,027,523	-				-0.4
3,027,523	-				+1.6
3,027,534	+				+0.6
3,027,576	+				-1.3
3,027,721	+				+0.0
3,027,721	+				+0.5
3,027,833	+		Pf6N2E2_2570	0.12	+0.2
3,027,833	+		Pf6N2E2_2570	0.12	-1.2
3,027,859	+		Pf6N2E2_2570	0.13	-1.5
3,027,860	-		Pf6N2E2_2570	0.13	+0.2
3,028,043	+		Pf6N2E2_2570	0.21	-0.4
3,028,043	+		Pf6N2E2_2570	0.21	-0.1
3,028,043	+		Pf6N2E2_2570	0.21	+1.3
3,028,044	-		Pf6N2E2_2570	0.21	-0.4
3,028,047	+		Pf6N2E2_2570	0.21	-1.0
3,028,048	-		Pf6N2E2_2570	0.21	-0.1
3,028,048	-		Pf6N2E2_2570	0.21	-0.7
3,028,048	-		Pf6N2E2_2570	0.21	+0.1
3,028,048	-		Pf6N2E2_2570	0.21	-0.0
3,028,166	+		Pf6N2E2_2570	0.26	-1.0
3,028,166	+		Pf6N2E2_2570	0.26	+0.9