Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2568

Experiment: Nitrate reduction, replicate C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nitrate reduction, replicate C
3,024,741	+				+0.6
3,024,741	+				+0.4
3,024,750	+				+0.9
3,024,752	+				-0.3
3,024,753	-				-0.4
3,024,753	-				+1.6
3,025,169	-		Pf6N2E2_2567	0.47	-1.0
3,025,169	-		Pf6N2E2_2567	0.47	-0.9
3,025,177	+		Pf6N2E2_2567	0.48	-1.4
3,025,177	+		Pf6N2E2_2567	0.48	-0.5
3,025,178	-		Pf6N2E2_2567	0.48	+0.6
3,025,178	-		Pf6N2E2_2567	0.48	+0.3
3,025,189	+		Pf6N2E2_2567	0.50	-0.5
3,025,189	+		Pf6N2E2_2567	0.50	+0.1
3,025,189	+		Pf6N2E2_2567	0.50	+1.6
3,025,500	+		Pf6N2E2_2567	0.85	-0.6
3,025,501	-		Pf6N2E2_2567	0.85	-0.9
3,025,501	-		Pf6N2E2_2567	0.85	-0.6
3,025,501	-		Pf6N2E2_2567	0.85	-1.4
3,025,531	-		Pf6N2E2_2567	0.88	-1.1
3,025,531	-		Pf6N2E2_2567	0.88	+1.6
3,025,531	-		Pf6N2E2_2567	0.88	-1.0
3,025,561	+				-0.4
3,025,561	+				-2.0
3,025,575	+				-1.4
3,025,818	+		Pf6N2E2_2568	0.23	-0.6
3,025,818	+		Pf6N2E2_2568	0.23	+1.6
3,025,819	-		Pf6N2E2_2568	0.23	-1.0
3,025,819	-		Pf6N2E2_2568	0.23	-1.2
3,025,819	-		Pf6N2E2_2568	0.23	-0.6
3,025,819	-		Pf6N2E2_2568	0.23	-1.4
3,025,819	-		Pf6N2E2_2568	0.23	-0.6
3,025,819	-		Pf6N2E2_2568	0.23	-0.5
3,025,886	+		Pf6N2E2_2568	0.32	+0.1
3,025,886	+		Pf6N2E2_2568	0.32	-0.3
3,025,887	-		Pf6N2E2_2568	0.32	-1.5
3,025,887	-		Pf6N2E2_2568	0.32	-1.0
3,025,992	+		Pf6N2E2_2568	0.46	-2.6
3,026,070	+		Pf6N2E2_2568	0.57	-1.4
3,026,108	+		Pf6N2E2_2568	0.62	-1.2
3,026,108	+		Pf6N2E2_2568	0.62	-1.8
3,026,109	-		Pf6N2E2_2568	0.62	-0.1
3,026,328	+				+0.0
3,026,329	-				-0.8
3,026,329	-				+0.0
3,026,415	+				-1.9
3,026,415	+				+1.6
3,026,484	-				+0.0
3,026,484	-				-2.0
3,026,484	-				+0.6
3,026,484	-				-2.2
3,026,607	-		Pf6N2E2_2569	0.19	-1.8
3,026,631	+		Pf6N2E2_2569	0.21	-1.2
3,026,631	+		Pf6N2E2_2569	0.21	-1.7
3,026,631	+		Pf6N2E2_2569	0.21	-0.7
3,026,631	+		Pf6N2E2_2569	0.21	-0.0
3,026,631	+		Pf6N2E2_2569	0.21	-1.3
3,026,632	-		Pf6N2E2_2569	0.21	-0.9
3,026,632	-		Pf6N2E2_2569	0.21	-1.4
3,026,632	-		Pf6N2E2_2569	0.21	-1.0
3,026,632	-		Pf6N2E2_2569	0.21	-1.0
3,026,651	+		Pf6N2E2_2569	0.23	-0.4
3,026,651	+		Pf6N2E2_2569	0.23	-0.7
3,026,651	+		Pf6N2E2_2569	0.23	-3.3
3,026,651	+		Pf6N2E2_2569	0.23	-0.9
3,026,651	+		Pf6N2E2_2569	0.23	-2.8
3,026,652	-		Pf6N2E2_2569	0.23	+0.5
3,026,926	-		Pf6N2E2_2569	0.47	-0.8
3,026,945	+		Pf6N2E2_2569	0.49	-0.4
3,027,107	+		Pf6N2E2_2569	0.63	-2.2
3,027,107	+		Pf6N2E2_2569	0.63	+1.6
3,027,290	-		Pf6N2E2_2569	0.79	+0.2
3,027,315	+		Pf6N2E2_2569	0.82	-0.6
3,027,315	+		Pf6N2E2_2569	0.82	-0.7
3,027,316	-		Pf6N2E2_2569	0.82	-1.5
3,027,316	-		Pf6N2E2_2569	0.82	-1.8
3,027,316	-		Pf6N2E2_2569	0.82	-0.8
3,027,356	+		Pf6N2E2_2569	0.85	-0.1
3,027,356	+		Pf6N2E2_2569	0.85	-1.0
3,027,356	+		Pf6N2E2_2569	0.85	-1.1
3,027,356	+		Pf6N2E2_2569	0.85	-1.8